CATH Domain: 1dgsA02 XML data for domain: 1dgsA02

Molscript image for 1dgsA02
1dgsA02
PDB coordinates for domain 1dgsA02

PDB 1dgs, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.1490 Dna Ligase; domain 1
3.30.1490.70 Gene3D
3.30.1490.70.5
3.30.1490.70.5.1
3.30.1490.70.5.1.2
3.30.1490.70.5.1.2.1
3.30.1490.70.5.1.2.1.1

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Segment boundaries for domain 1dgsA02

Chopping figure for domain 1dgsA02
DomainStart PDB ResidueStop PDB Residue
1dgsA01 1 76
1dgsA02 84 118
1dgsA02 251 310
1dgsA03 119 250
1dgsA04 317 389
1dgsA05 430 498
1dgsA06 499 581

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.30.1490.70.5.1.2.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1a0iA01 81.40 Enterobacteria phage T7DNA ligase 3.30.1490.70 83 10 74 3.15 4.23
1x9nA02 77.82 Nucleotide excision repairDNA replicationDNA ligase 1Base excision repairDNA binding 3.30.1490.70 83 15 74 3.63 4.87
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1dgsA02
SLDNAFTYEEVLAFEERLEREAEAPSLYTVEHKVDVEHCYEKALGAEGVEEVYRRGLAQRHALPFEADGVVLKLDDLTLW
GELGYTARAPRFALA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1dgsA02
SLDNAFTYEEVLAFEERLEREAEAPSLYTVEHKVDVEHCYEKALGAEGVEEVYRRGLAQRHALPFEADGVVLKLDDLTLW
GELGYTARAPRFALA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:10

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:10

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:21

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"