CATH Domain: 1dceA03 XML data for domain: 1dceA03

Molscript image for 1dceA03
1dceA03
PDB coordinates for domain 1dceA03

PDB 1dce, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.80 Alpha-Beta Horseshoe
3.80.10 Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
3.80.10.10 Ribonuclease Inhibitor Gene3D
3.80.10.10.16
3.80.10.10.16.1
3.80.10.10.16.1.1
3.80.10.10.16.1.1.1
3.80.10.10.16.1.1.1.1

[top]
Segment boundaries for domain 1dceA03

Chopping figure for domain 1dceA03
DomainStart PDB ResidueStop PDB Residue
1dceA01 2 241
1dceA01 353 429
1dceA02 242 344
1dceA03 431 566

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.80.10.10.16.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1w8aA00 80.00 Protein slitProteinaceous extracellular matrixProtein bindingDrosophila melanogasterEpithelial cell migration, open tracheal system 3.80.10.10 189 19 66 2.65 3.98
2ifgA01 79.72 High affinity nerve growth factor receptorIntegral to plasma membraneTransmembrane receptor protein tyrosine kinase activityHomo sapiens 3.80.10.10 156 19 83 3.81 4.57
1fo1B00 79.10 Nuclear RNA export factor 1Homo sapiensProtein binding 3.80.10.10 163 19 68 3.13 4.56
[1]
Displaying entries 1 to 3 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1dceA03
LENSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRL
QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1dceA03
LENSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRL
QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:20

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"