CATH Domain: 1dbhA02 XML data for domain: 1dbhA02

Molscript image for 1dbhA02
1dbhA02
PDB coordinates for domain 1dbhA02

PDB 1dbh, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.29 PH-domain like
2.30.29.30 Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) Gene3D
2.30.29.30.23
2.30.29.30.23.1
2.30.29.30.23.1.1
2.30.29.30.23.1.1.1
2.30.29.30.23.1.1.1.1

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Segment boundaries for domain 1dbhA02

Chopping figure for domain 1dbhA02
DomainStart PDB ResidueStop PDB Residue
1dbhA01 198 421
1dbhA02 423 550

Structural Neighbourhood (13 entries)

There are 13 matching structural neighberhood comparisons for CATH ID 2.30.29.30.23.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 13 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1kz7C02 83.85 Mus musculusGuanine nucleotide exchange factor DBSRho guanyl-nucleotide exchange factor activityRho protein signal transductionLamellipodium 2.30.29.30 134 19 84 3.75 4.45
2rgnB02 83.54 Homo sapiensGuanine nucleotide exchange factor GEFT 2.30.29.30 123 10 73 2.20 3.00
3cxbB00 82.78 Kinesin bindingPleckstrin homology domain-containing family M member 2Golgi organizationHomo sapiens 2.30.29.30 102 16 70 2.33 3.28
2dn6A00 82.29 CytoplasmPlasma membraneSwitch-associated protein 70Homo sapiens 2.30.29.30 115 15 76 3.45 4.50
1qqgA01 81.36 Phosphoinositide 3-kinase bindingAldosterone-regulated sodium reabsorptionNeurotrophin signaling pathwayNegative regulation of insulin secretionInsulin-like growth factor receptor signaling pathway 2.30.29.30 103 15 73 3.32 4.52
1omwA05 80.79 MembraneNegative regulation of the force of heart contraction by chemical signalG-protein coupled receptor kinase activityChemokine signaling pathwayMuscarinic acetylcholine receptor signaling pathway 2.30.29.30 101 8 73 2.93 3.99
1qqgA02 79.98 Phosphoinositide 3-kinase bindingAldosterone-regulated sodium reabsorptionNeurotrophin signaling pathwayNegative regulation of insulin secretionInsulin-like growth factor receptor signaling pathway 2.30.29.30 104 5 69 2.48 3.58
2he7A03 78.77 Tight junctionErythrocyte membrane protein band 4.1Homo sapiensBand 4.1-like protein 3Cell-cell junction 2.30.29.30 95 7 66 2.63 3.93
2coaA01 77.81 Homo sapiensSerine/threonine-protein kinase D2 2.30.29.30 118 11 73 3.14 4.28
1p5tA00 77.66 Mus musculusRas protein signal transductionDocking protein 1Transmembrane receptor protein tyrosine kinase signaling pathwayTransmembrane receptor protein tyrosine kinase signaling protein activity 2.30.29.30 105 5 67 2.85 4.21
1q67A01 77.39 MRNA-decapping enzyme subunit 1Cytoplasmic mRNA processing bodyRNA degradationEnzyme activator activityMRNA binding 2.30.29.30 140 4 67 2.70 4.02
1ef1A03 76.66 Receptor bindingLeukocyte migrationCytoskeletonMembrane to membrane dockingNucleolus 2.30.29.30 95 13 70 3.27 4.66
1xr0B01 76.39 Fibroblast growth factor receptor substrate 2Membrane fractionIntegral to plasma membraneTransmembrane receptor protein tyrosine kinase adaptor activityNeurotrophin signaling pathway 2.30.29.30 91 10 62 2.59 4.17
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Displaying entries 1 to 13 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1dbhA02
NEIQKNIDGWEGKDIGQCCNEFIEGTLTRVGAKHERHIFLFDGLICCKSNHGQPRLPGASNAEYRLKEKFFRKVQINDKD
DTNEYKHAFEIILKDENSVIFSAKSAEEKNNWAALISLQYRSTL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1dbhA02
NEIQKNIDGWEGKDIGQCCNEFIXEGTLTRVGAKHERHIFLFDGLXICCKSNHGQPRLPGASNAEYRLKEKFFXRKVQIN
DKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWXAALISLQYRSTLE
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:20

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"