CATH Domain: 1d7pM00 XML data for domain: 1d7pM00

Molscript image for 1d7pM00
1d7pM00
PDB coordinates for domain 1d7pM00

PDB 1d7p, Chain M, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.260 Galactose-binding domain-like Gene3D
2.60.120.260.4
2.60.120.260.4.1
2.60.120.260.4.1.1
2.60.120.260.4.1.1.2
2.60.120.260.4.1.1.2.1

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Segment boundaries for domain 1d7pM00

Chopping figure for domain 1d7pM00
DomainStart PDB ResidueStop PDB Residue
1d7pM00 2171 2329

Structural Neighbourhood (15 entries)

There are 15 matching structural neighberhood comparisons for CATH ID 2.60.120.260.4.1.1.2.1 (SIMAX score < 5)

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Displaying entries 1 to 15 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3bn6A00 93.93 LactadherinBos taurus 2.60.120.260 158 38 96 1.12 1.16
2qqiA01 93.60 Cell-cell signalingAxon guidanceOrgan morphogenesisPositive regulation of cell proliferationHomo sapiens 2.60.120.260 153 37 94 1.16 1.22
2wuhA00 91.69 Discoidin domain receptor family, member 2 [EC:2.7.10.1]Discoidin domain-containing receptor 2Integral to plasma membraneCell adhesionTransmembrane receptor protein tyrosine kinase activity 2.60.120.260 163 29 93 1.70 1.82
2qqiA02 87.67 Cell-cell signalingAxon guidanceOrgan morphogenesisPositive regulation of cell proliferationHomo sapiens 2.60.120.260 154 35 96 2.94 3.06
1k3iA01 84.62 Gibberella zeaeGalactose oxidase 2.60.120.260 154 12 88 2.68 3.03
1w8oA03 84.05 Micromonospora viridifaciensSialidase 2.60.120.260 145 17 86 2.37 2.74
1k12A00 82.73 FucolectinCalcium ion bindingFucose bindingRegulation of complement activation, lectin pathwayAnguilla anguilla 2.60.120.260 158 12 86 3.03 3.49
1tvgA00 81.29 Heat shock protein beta-11Homo sapiens 2.60.120.260 136 10 82 2.65 3.21
1jhjA00 81.01 Progesterone-mediated oocyte maturationUbiquitin mediated proteolysisOocyte meiosisCell cycleMitotic anaphase 2.60.120.260 161 9 83 3.42 4.11
1o59A02 80.68 Allantoicase [EC:3.5.3.4]Purine metabolismSaccharomyces cerevisiaeAllantoicaseAllantoin catabolic process 2.60.120.260 138 9 83 3.01 3.59
3k77A00 79.29 DNA repair protein XRCC1Homo sapiensProtein binding 2.60.120.260 152 5 80 2.98 3.73
1gqpB00 78.71 Mitotic sister chromatid segregationCyclin catabolic processMeiosis - yeastUbiquitin mediated proteolysisProtein binding 2.60.120.260 188 9 70 3.24 4.58
1o59A01 78.10 Allantoicase [EC:3.5.3.4]Purine metabolismSaccharomyces cerevisiaeAllantoicaseAllantoin catabolic process 2.60.120.260 174 8 77 2.97 3.86
1gwmA00 74.29 Piromyces equiNon-catalytic protein 1 2.60.120.360 153 4 78 3.89 4.94
1gu3A00 74.06 Cellulomonas fimiEndoglucanase C 2.60.120.260 142 5 77 3.69 4.77
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Displaying entries 1 to 15 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1d7pM00
LNSCSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKS
LLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNCLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1d7pM00
LNSCSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKS
LLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNCLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQ
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:46

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:46

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:07

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"