Domain assigned by cuff on 17 Oct 2008 14:45
homology match
CATH Domain: 1d66A00
1d66A00
PDB 1d66, Chain A, Domain 0
| CATH Code | Level Description | Links |
|---|---|---|
 4
| Few Secondary Structures | |
 4.10
| Irregular | |
 4.10.240
| CD2-Gal4 | |
 4.10.240.10
| CD2-Gal4 | Gene3D |
 4.10.240.10.1
| ||
 4.10.240.10.1.1
| ||
 4.10.240.10.1.1.1
| ||
 4.10.240.10.1.1.1.1
| ||
 4.10.240.10.1.1.1.1.1
|
Structural Neighbourhood (4 entries)
There are 4 matching structural neighberhood comparisons for CATH ID 4.10.240.10.1.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 4 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
|
1d66B01 | 84.87 | 4.10.240.10 | 33 | 100 | 57 | 0.75 | 1.30 | |
|
1pycA00 | 81.84 | 4.10.240.10 | 41 | 36 | 66 | 2.12 | 3.18 | |
|
1zmeC01 | 81.81 | 4.10.240.10 | 31 | 35 | 54 | 0.98 | 1.80 | |
|
1f4sP00 | 75.89 | 4.10.240.10 | 65 | 21 | 61 | 2.67 | 4.34 |
[1]
Displaying entries 1 to 4 (page 1 of 1)
Domain History Events (41)
Domain assignment manual match h by tronnberg on 10 Dec 2007 16:12
SSAP:84.9 OV: 57 SEQ: 100. Maybe the terminal alpha helix should been chopped of. Very similar linkage.
Homcheck review by tronnberg on 10 Dec 2007 16:12
SSAP:84.9 OV: 57 SEQ: 100. Maybe the terminal alpha helix should been chopped of. Very similar linkage.
Flow stage update by tronnberg on 10 Dec 2007 16:12
SSAP:84.9 OV: 57 SEQ: 100. Maybe the terminal alpha helix should been chopped of. Very similar linkage.
Homcheck allotment by tronnberg on 10 Dec 2007 16:09
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by tronnberg on 10 Dec 2007 16:09
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by auto on 09 Dec 2007 15:08
Calculated SCOP results for 1d66A00 and inserted them into the database.
Domain scan scop cath by auto on 09 Dec 2007 15:08
Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 5 results for 1d66A00
Flow stage update by auto on 07 Dec 2007 15:07
Retrieved PRC_PFAMCATH results for job ID SID1781580507588656 and results inserted.
Domain scan prc pfamcath by auto on 07 Dec 2007 15:07
Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 5 results for 1d66A00
Update comment by auto on 06 Dec 2007 14:59
PRC_PFAMCATH job SID1781580507588656 is not yet finished.
Prc pfamcath submit by auto on 06 Dec 2007 14:56
The entry "1d66A00" has been submitted to the PRC_PFAMCATH webservice.
Flow stage update by auto on 06 Dec 2007 14:56
The entry "1d66A00" has been submitted to the PRC_PFAMCATH webservice.
Flow stage update by auto on 06 Dec 2007 14:50
Retrieved SSAP results for job ID SID1104124267437680 and results inserted.
Domain scan ssap cath by auto on 06 Dec 2007 14:49
Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 383 results for 1d66A00
Update comment by auto on 05 Dec 2007 19:09
SSAP job SID1104124267437680 is not yet finished.
Flow stage update by auto on 05 Dec 2007 19:05
The entry "1d66A00" has been submitted to the SSAP webservice.
Ssap cath submit by auto on 05 Dec 2007 19:05
The entry "1d66A00" has been submitted to the SSAP webservice.
Flow stage update by auto on 05 Dec 2007 18:58
Retrieved PRC results for job ID SID2403221384483552 and inserted them into the database.
Domain scan prc cath by auto on 05 Dec 2007 18:58
Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 6 results for 1d66A00
Update comment by auto on 05 Dec 2007 15:07
PRC job SID2403221384483552 is not yet finished.
Prc cath submit by auto on 05 Dec 2007 15:01
The entry "1d66A00" has been submitted to the PRC webservice.
Flow stage update by auto on 05 Dec 2007 15:01
The entry "1d66A00" has been submitted to the PRC webservice.
Flow stage update by auto on 05 Dec 2007 14:53
Retrieved HMM(SAM) results for job ID SID8952256063647536 and inserted them into the database.
Domain scan sam cath by auto on 05 Dec 2007 14:53
Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 4 results for 1d66A00
Update comment by auto on 05 Dec 2007 11:02
HMM(SAM) job SID8952256063647536 is not yet finished.
Flow stage update by auto on 05 Dec 2007 10:57
The entry "1d66A00" has been submitted to the HMM (SAM) webservice.
Sam cath submit by auto on 05 Dec 2007 10:57
The entry "1d66A00" has been submitted to the HMM (SAM) webservice.
Flow stage update by auto on 05 Dec 2007 10:51
Retrieved "1d66A00" CATHEDRAL results for job ID SID6629542898598012 and inserted them into the database.
Domain scan cathedral cath by auto on 05 Dec 2007 10:50
Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 145 results for 1d66A00
Update comment by auto on 05 Dec 2007 06:39
"1d66A00" CATHEDRAL job SID6629542898598012 is not yet finished.
Flow stage update by auto on 05 Dec 2007 06:33
The entry "1d66A00" has been submitted to the CATHEDRAL webservice.
Cathedral cath submit by auto on 05 Dec 2007 06:33
The entry "1d66A00" has been submitted to the CATHEDRAL webservice.
Flow stage update by auto on 05 Dec 2007 06:27
ScanList with 11650 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/1d66A00.scanlist" for "1d66A00"
Write scan list by auto on 05 Dec 2007 06:26
Writing ScanList containing 11650 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/1d66A00.scanlist" for domain "1d66A00"
Flow stage update by auto on 23 Nov 2007 14:12
No satisfactory AssignClose result found.
Flow stage update by auto on 23 Nov 2007 14:03
No in_process hits for Domain "1d66A00" ready to be processed
Flow stage update by auto on 23 Nov 2007 14:02
NW result present for Domain "1d66A00"
Flow stage update by auto on 23 Nov 2007 14:01
All required files are present for Domain "1d66A00"
Flow stage update by auto on 13 Nov 2007 00:10
Beginning processing for Domain "1d66A00"
Insertion by cuff on 25 Sep 2007 10:45
nice chopping
