CATH Domain: 1d1rA00 XML data for domain: 1d1rA00

Molscript image for 1d1rA00
1d1rA00
PDB coordinates for domain 1d1rA00

PDB 1d1r, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.780 Translation Initiation Factor Eif1
3.30.780.10 Translation Initiation Factor Eif1 Gene3D
3.30.780.10.1
3.30.780.10.1.1
3.30.780.10.1.1.1
3.30.780.10.1.1.1.1
3.30.780.10.1.1.1.1.1

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Segment boundaries for domain 1d1rA00

Chopping figure for domain 1d1rA00
DomainStart PDB ResidueStop PDB Residue
1d1rA00 29 111

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.30.780.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1opzA00 75.31 Cu2+-exporting ATPase [EC:3.6.3.4]Bacillus subtilisCopper-exporting P-type ATPase A 3.30.70.100 76 9 79 3.79 4.77
1b4bA00 73.16 Geobacillus stearothermophilusArginine repressor 3.30.1360.40 71 9 80 3.72 4.61
1lfwA03 72.93 Lactobacillus delbrueckii subsp. lactisBeta-Ala-Xaa dipeptidase 3.30.70.360 88 10 78 3.31 4.22
2xmjA00 70.07 Ssr2857 proteinCopper ion bindingProtein bindingSynechocystis sp. PCC 6803 3.30.70.100 63 6 66 3.23 4.87
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1d1rA00
KGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAG
GLE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1d1rA00
KGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAG
GLEHHHHHH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:32

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"