CATH Domain: 1cy5A00 XML data for domain: 1cy5A00

Molscript image for 1cy5A00
1cy5A00
PDB coordinates for domain 1cy5A00

PDB 1cy5, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.533 Death Domain, Fas
1.10.533.10 Death Domain, Fas Gene3D
1.10.533.10.1
1.10.533.10.1.1
1.10.533.10.1.1.1
1.10.533.10.1.1.1.1
1.10.533.10.1.1.1.1.1

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Segment boundaries for domain 1cy5A00

Chopping figure for domain 1cy5A00
DomainStart PDB ResidueStop PDB Residue
1cy5A00 1 93

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 1.10.533.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3ygsP00 90.70 Pathways in cancerActivation of caspase activity by cytochrome cEnzyme activator activityNon-small cell lung cancerAlzheimer's disease 1.10.533.10 97 19 94 1.71 1.80
1dgnA00 87.34 Caspase recruitment domain-containing protein 18NOD-like receptor signaling pathwayCaspase recruitment domain-containing protein 18Homo sapiens 1.10.533.10 89 21 92 2.27 2.46
1wmgA00 82.97 Mus musculusNetrin receptor UNC5BNetrin receptor unc-5Axon guidance 1.10.533.10 86 10 82 3.00 3.63
3ezqB00 82.46 FAS (TNFRSF6)-associated via death domainIdentical protein bindingPathways in cancerChagas diseaseAlzheimer's disease 1.10.533.10 99 7 84 3.41 4.02
3crdA00 81.82 Death domain-containing protein CRADDDeath domain bindingProtease bindingProtein binding, bridgingHomo sapiens 1.10.533.10 100 14 90 2.76 3.07
1d2zA00 81.72 Protein domain specific bindingRegulation of proteolysisHemocyte proliferationZygotic specification of dorsal/ventral axisPlasma membrane 1.10.533.10 102 7 84 3.96 4.70
1a1wA00 80.36 FAS (TNFRSF6)-associated via death domainIdentical protein bindingPathways in cancerChagas diseaseAlzheimer's disease 1.10.533.10 83 13 83 2.79 3.33
1ucpA00 80.02 Protein homodimerization activityApoptosis-associated speck-like protein containing a CARDPositive regulation of interleukin-1 beta secretionPyrin domain bindingTumor necrosis factor-mediated signaling pathway 1.10.533.10 91 10 81 2.90 3.56
1ngrA00 79.35 Negative regulation of muscle organ developmentRattus norvegicusNucleusNeurotrophin signaling pathwayTumor necrosis factor receptor superfamily member 16 1.10.533.10 85 10 89 4.04 4.53
1ichA00 76.99 Integral to plasma membraneChagas diseaseTumor necrosis factor receptor superfamily member 1AAlzheimer's diseasePositive regulation of I-kappaB kinase/NF-kappaB cascade 1.10.533.10 87 5 85 3.85 4.48
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1cy5A00
MDAKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIKMILKKDNDSYVSFYNALLHEGY
KDLAALLHDGIPV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1cy5A00
MDAKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIKMILKKDNDSYVSFYNALLHEGY
KDLAALLHDGIPVVSSS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:13

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:13

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:33

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"