CATH Domain: 1cxqA00 XML data for domain: 1cxqA00

Molscript image for 1cxqA00
1cxqA00
PDB coordinates for domain 1cxqA00

PDB 1cxq, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.420 Nucleotidyltransferase; domain 5
3.30.420.10 Gene3D
3.30.420.10.1
3.30.420.10.1.1
3.30.420.10.1.1.1
3.30.420.10.1.1.1.1
3.30.420.10.1.1.1.1.1

[top]
Segment boundaries for domain 1cxqA00

Chopping figure for domain 1cxqA00
DomainStart PDB ResidueStop PDB Residue
1cxqA00 52 198

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.30.420.10.1.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1exqA00 86.78 HIV-1 M:B_HXB2RGag-Pol polyprotein 3.30.420.10 147 22 83 2.32 2.77
[1]
Displaying entries 1 to 1 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1cxqA00
GRGLGPLQIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQHGRVTSVAAQHHWATAIAVLGRPKAIKTDNGSCFTSKST
REWLARWGIAHTTGIPGQAMVERANRLLKDKIRVLAEGDGFMKRIPTSKQGELLAKAMYALNH
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1cxqA00
PLREGRGLGPLQIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQHGRVTSVAAQHHWATAIAVLGRPKAIKTDNGSCFT
SKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDKIRVLAEGDGFMKRIPTSKQGELLAKAMYALNHFERGENTKT
NL
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:28

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"