CATH Domain: 1cwvA03 XML data for domain: 1cwvA03

Molscript image for 1cwvA03
1cwvA03
PDB coordinates for domain 1cwvA03

PDB 1cwv, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.920 Gene3D
2.60.40.920.3
2.60.40.920.3.1
2.60.40.920.3.1.1
2.60.40.920.3.1.1.1
2.60.40.920.3.1.1.1.1

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Segment boundaries for domain 1cwvA03

Chopping figure for domain 1cwvA03
DomainStart PDB ResidueStop PDB Residue
1cwvA01 503 595
1cwvA02 596 692
1cwvA03 693 794
1cwvA04 796 886
1cwvA05 887 986

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 2.60.40.920.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1dceA02 77.94 Rattus norvegicusRab geranylgeranyltransferase activityProtein geranylgeranyltransferase type II [EC:2.5.1.60]Geranylgeranyl transferase type-2 subunit alpha 2.60.40.1130 103 7 79 3.70 4.65
1f00I02 76.97 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 2.60.40.1080 89 7 74 3.09 4.15
1ix2A00 76.92 Escherichia coliCopper resistance protein C 2.60.40.1220 97 8 80 3.67 4.57
3cmgA04 76.47 Putative beta-galactosidaseBacteroides fragilis NCTC 9343 2.60.40.1560 87 10 78 3.74 4.77
1im3D00 73.40 Unique short US2 glycoproteinHuman herpesvirus 5 strain AD169 2.60.40.1200 95 8 80 3.71 4.61
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1cwvA03
ADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQNGVPVSISPITEQPDSYTATVVGNSVGDV
TITPQVDTLILSTLQKKISLFP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1cwvA03
ADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQNGVPVSISPITEQPDSYTATVVGNSVGDV
TITPQVDTLILSTLQKKISLFP
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:18

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"