CATH Domain: 1cwvA02 XML data for domain: 1cwvA02

Molscript image for 1cwvA02
1cwvA02
PDB coordinates for domain 1cwvA02

PDB 1cwv, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.920 Gene3D
2.60.40.920.2
2.60.40.920.2.1
2.60.40.920.2.1.1
2.60.40.920.2.1.1.1
2.60.40.920.2.1.1.1.1

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Segment boundaries for domain 1cwvA02

Chopping figure for domain 1cwvA02
DomainStart PDB ResidueStop PDB Residue
1cwvA01 503 595
1cwvA02 596 692
1cwvA03 693 794
1cwvA04 796 886
1cwvA05 887 986

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 2.60.40.920.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1cwvA03 91.24 InvasinYersinia pseudotuberculosis 2.60.40.920 102 23 94 1.42 1.51
1dceA02 78.99 Rattus norvegicusRab geranylgeranyltransferase activityProtein geranylgeranyltransferase type II [EC:2.5.1.60]Geranylgeranyl transferase type-2 subunit alpha 2.60.40.1130 103 6 78 3.19 4.06
3cmgA04 77.88 Putative beta-galactosidaseBacteroides fragilis NCTC 9343 2.60.40.1560 87 13 79 3.30 4.16
1ix2A00 77.46 Escherichia coliCopper resistance protein C 2.60.40.1220 97 10 81 3.64 4.47
1im3D00 75.86 Unique short US2 glycoproteinHuman herpesvirus 5 strain AD169 2.60.40.1200 95 5 82 3.35 4.06
1nkgA02 75.68 Rhamnogalacturonase BAspergillus aculeatus 2.60.40.1120 85 9 71 3.52 4.95
1p5uA02 73.42 Yersinia pestisChaperone protein caf1MProtein binding 2.60.40.1070 84 11 79 3.77 4.75
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1cwvA02
GTIAADKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTLGNMGVITDHNDGTYSAPLTSTTLGVATVTV
KVDGAAFSVPSVTVNFT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1cwvA02
GTIAADKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTLGNMGVITDHNDGTYSAPLTSTTLGVATVTV
KVDGAAFSVPSVTVNFT
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:18

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"