CATH Domain: 1cs1A01 XML data for domain: 1cs1A01

Molscript image for 1cs1A01
1cs1A01
PDB coordinates for domain 1cs1A01

PDB 1cs1, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.640 Aspartate Aminotransferase; domain 2
3.40.640.10 Type I PLP-dependent aspartate aminotransferase-like (Major domain) Gene3D
3.40.640.10.4
3.40.640.10.4.1
3.40.640.10.4.1.1
3.40.640.10.4.1.1.1
3.40.640.10.4.1.1.1.1

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Segment boundaries for domain 1cs1A01

Chopping figure for domain 1cs1A01
DomainStart PDB ResidueStop PDB Residue
1cs1A01 3 247
1cs1A02 248 386

Structural Neighbourhood (12 entries)

There are 12 matching structural neighberhood comparisons for CATH ID 3.40.640.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 12 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ukjA01 89.99 Methionine gamma-lyasePseudomonas putida 3.40.640.10 254 35 95 1.58 1.65
1qgnG01 89.05 Cystathionine gamma-synthaseNicotiana tabacum 3.40.640.10 259 32 93 1.56 1.68
2fq6A01 87.88 Nitrogen metabolismSelenoamino acid metabolismSulfur metabolismMetabolic pathwaysCysteine and methionine metabolism 3.40.640.10 254 28 95 1.89 1.98
1o69A01 82.17 Campylobacter jejuniAminotransferase homolog 3.40.640.10 233 12 84 4.00 4.76
1o4sA02 80.74 Tyrosine metabolismThermotoga maritimaArginine and proline metabolismAspartate aminotransferase [EC:2.6.1.1]Metabolic pathways 3.40.640.10 221 15 79 2.89 3.62
1fg7A01 79.85 Tyrosine metabolismHistidine metabolismMetabolic pathwaysPhenylalanine metabolismNovobiocin biosynthesis 3.40.640.10 203 15 77 2.83 3.67
1c7nA02 79.45 Treponema denticolaHemolysin 3.40.640.10 225 12 78 3.06 3.89
3ffhB02 79.27 Tyrosine metabolismListeria innocuaHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.40.640.10 208 13 78 3.92 4.98
1gd9A02 78.94 Tyrosine metabolismArginine and proline metabolismAspartate aminotransferase [EC:2.6.1.1]Pyrococcus horikoshiiMetabolic pathways 3.40.640.10 223 13 79 3.04 3.80
1uu1A02 78.75 Thermotoga maritimaTyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.40.640.10 203 10 79 3.69 4.64
2hoxA02 77.37 Alliin lyase 1Allium sativum 3.40.640.10 210 15 72 3.62 4.96
3d6kA02 75.60 Corynebacterium diphtheriaePutative uncharacterized protein 3.40.640.10 237 9 82 3.82 4.64
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Displaying entries 1 to 12 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1cs1A01
RKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHL
VTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHL
AREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLR
GLRT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1cs1A01
MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAI
HLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKIC
HLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTXYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYL
LLRGLRT
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 21 Dec 2006 19:39

Assigning to "3.40.640.10" based on similarity with "1ibjA01"

Flow stage update by auto on 21 Dec 2006 19:37

No in_process hits for Domain "1cs1A01" ready to be processed

Flow stage update by auto on 21 Dec 2006 19:37

NW result present for Domain "1cs1A01"

Flow stage update by auto on 20 Dec 2006 19:31

All required files are present for Domain "1cs1A01"

Flow stage update by auto on 20 Dec 2006 03:35

Beginning processing for Domain "1cs1A01"

Insertion by auto on 20 Dec 2006 03:23

Final ChopClose added based on similarity with "1cs1B"