CATH Domain: 1cktA00 XML data for domain: 1cktA00

Molscript image for 1cktA00
1cktA00
PDB coordinates for domain 1cktA00

PDB 1ckt, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.30 DNA Binding (I), subunit A
1.10.30.10 DNA Binding (I), subunit A Gene3D
1.10.30.10.4
1.10.30.10.4.1
1.10.30.10.4.1.1
1.10.30.10.4.1.1.1
1.10.30.10.4.1.1.1.1

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Segment boundaries for domain 1cktA00

Chopping figure for domain 1cktA00
DomainStart PDB ResidueStop PDB Residue
1cktA00 7 77

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 1.10.30.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2lefA00 83.51 Odontogenesis of dentine-containing toothLymphoid enhancer-binding factor 1Paraxial mesoderm formationRegulation of Wnt receptor signaling pathwayBMP signaling pathway 1.10.30.10 86 9 80 2.42 3.02
1l8yA00 79.27 Homo sapiensNucleolar transcription factor 1Protein bindingRNA polymerase I transcription factor activity 1.10.30.10 83 21 80 2.70 3.34
1hsmA00 79.06 Cricetulus griseusHigh mobility group protein B1 1.10.30.10 79 18 87 3.23 3.70
1v63A00 79.04 Mus musculusChromatin silencing at rDNANucleolusPositive regulation of transcription from RNA polymerase I promoterNucleolar transcription factor 1 1.10.30.10 101 16 66 3.05 4.60
1k99A00 78.89 Homo sapiensNucleolar transcription factor 1RNA polymerase I transcription factor activityProtein binding 1.10.30.10 91 18 75 3.49 4.60
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1cktA00
KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1cktA00
KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:24

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"