CATH Domain: 1chuA03 XML data for domain: 1chuA03

Molscript image for 1chuA03
1chuA03
PDB coordinates for domain 1chuA03

PDB 1chu, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.58 Methane Monooxygenase Hydroxylase; Chain G, domain 1
1.20.58.100 Gene3D
1.20.58.100.7
1.20.58.100.7.1
1.20.58.100.7.1.1
1.20.58.100.7.1.1.1
1.20.58.100.7.1.1.1.1

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Segment boundaries for domain 1chuA03

Chopping figure for domain 1chuA03
DomainStart PDB ResidueStop PDB Residue
1chuA01 2 239
1chuA01 355 410
1chuA02 245 348
1chuA03 429 516

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 1.20.58.100.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3a8yD00 82.66 Perinuclear region of cytoplasmRegulation of inclusion body assemblyChaperone bindingInclusion bodyBCL2-associated athanogene 5 1.20.58.120 100 9 82 3.47 4.23
1hx1B00 82.63 Anti-apoptosisReceptor signaling protein activityNucleusProtein bindingHomo sapiens 1.20.58.120 112 10 74 2.90 3.91
1uurA01 82.34 Specific transcriptional repressor activityProtein homodimerization activityTranscription activator activityNucleusSignal transducer and activator of transcription A 1.20.58.240 110 6 74 3.06 4.10
1j5wA02 80.98 Aminoacyl-tRNA biosynthesisThermotoga maritimaGlycyl-tRNA synthetase alpha subunitGlycyl-tRNA synthetase alpha chain [EC:6.1.1.14] 1.20.58.180 76 5 80 3.98 4.93
1o3xA00 78.88 ADP-ribosylation factor-binding protein GGA1Homo sapiensProtein bindingIntracellular protein transport 1.20.58.160 112 5 75 2.95 3.93
1pd3A00 78.08 Nuclear export proteinInfluenza A virus (A/Puerto Rico/8/1934(H1N1)) 1.10.287.230 54 9 59 2.25 3.81
1j1jA02 77.97 DNA recombinationNucleusTranslinHomo sapiens 1.20.58.200 85 7 70 2.81 3.99
1t72D01 76.29 Phosphate transport system protein phoU homologPhosphate transport system proteinAquifex aeolicus 1.20.58.220 100 4 76 3.61 4.75
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1chuA03
NPDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRK
ESRGLHFT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1chuA03
NPDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRK
ESRGLHFT
BLAST against CATH

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Domain History Events (7)

Domain assigned by lewis on 09 Jan 2007 13:16

Assigning domain 1chuA03 to 1.20.58.100 (as agreed with the CATH update team) after the chain has been rechopped. The reason is that the domain is very similar to the old domain 1chuA03 (from the previous chopping at "Sun Mar 5 16:16:49 2006") which was in 1.20.58.100 at the time the chain was unchopped.

Flow stage update by auto on 21 Dec 2006 19:39

No satisfactory AssignClose result found.

Flow stage update by auto on 21 Dec 2006 19:37

No in_process hits for Domain "1chuA03" ready to be processed

Flow stage update by auto on 21 Dec 2006 19:37

NW result present for Domain "1chuA03"

Flow stage update by auto on 20 Dec 2006 19:31

All required files are present for Domain "1chuA03"

Flow stage update by auto on 19 Dec 2006 19:40

Beginning processing for Domain "1chuA03"

Insertion by cuff on 19 Dec 2006 17:31

small batch of choppings to go