CATH Domain: 1cg2A02 XML data for domain: 1cg2A02

Molscript image for 1cg2A02
1cg2A02
PDB coordinates for domain 1cg2A02

PDB 1cg2, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.70 Alpha-Beta Plaits
3.30.70.360 Gene3D
3.30.70.360.10
3.30.70.360.10.1
3.30.70.360.10.1.1
3.30.70.360.10.1.1.1
3.30.70.360.10.1.1.1.1

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Segment boundaries for domain 1cg2A02

Chopping figure for domain 1cg2A02
DomainStart PDB ResidueStop PDB Residue
1cg2A01 26 213
1cg2A01 324 414
1cg2A02 214 323

Structural Neighbourhood (20 entries)

There are 20 matching structural neighberhood comparisons for CATH ID 3.30.70.360.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 20 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ia0B02 80.17 Pyrococcus furiosusUncharacterized HTH-type transcriptional regulator PF0864 3.30.70.920 99 4 69 2.21 3.20
1x7vC00 79.20 Pseudomonas aeruginosaPutative uncharacterized protein 3.30.70.900 97 5 77 2.81 3.64
2pd1A01 79.10 Nitrosomonas europaeaPutative uncharacterized protein 3.30.70.900 93 5 78 2.80 3.58
3bm7A00 78.78 Caulobacter vibrioidesPutative uncharacterized protein 3.30.70.900 101 6 76 3.11 4.07
1lq9A00 78.55 Biosynthesis of type II polyketide productsStreptomyces coelicolorActVA 6 protein 3.30.70.900 112 9 75 2.80 3.73
1s99A01 78.50 Bacillus subtilisPutative HMP/thiamine-binding protein ykoF 3.30.70.930 77 10 65 2.50 3.82
1q5yD00 78.34 CopG family transcriptional regulator, nickel-responsive regulatorNickel-responsive regulatorProtein bindingEscherichia coli K-12 3.30.70.1150 80 13 69 2.58 3.73
2nzcA00 78.30 Thermotoga maritimaPutative uncharacterized protein 3.30.70.1150 77 7 69 2.82 4.08
1iujB00 78.27 TT1380 proteinThermus thermophilus 3.30.70.900 103 8 77 3.17 4.10
2iboA00 78.22 Streptococcus pneumoniaePutative uncharacterized protein 3.30.70.930 87 10 67 2.83 4.21
1q8kA03 78.22 Translation initiation factor activityTranslation initiation factor eIF-2 alpha subunitEukaryotic translation initiation factor 2 subunit 1PolysomeHomo sapiens 3.30.70.1130 116 3 75 3.07 4.05
2od4B01 77.31 3.30.70.900 81 8 68 2.95 4.33
1yqhB00 76.33 IG hypothetical 16092Bacillus cereus ATCC 14579 3.30.70.930 98 6 67 2.33 3.46
2pokA02 76.26 Lysine biosynthesisMetabolic pathwaysSuccinyl-diaminopimelate desuccinylase [EC:3.5.1.18]Peptidase, M20/M25/M40 familyStreptococcus pneumoniae 3.30.70.360 170 13 62 3.09 4.91
2fb0A00 76.20 Bacteroides thetaiotaomicronPutative uncharacterized protein 3.30.70.900 91 9 80 3.87 4.78
1q8bA00 75.62 Bacillus subtilisUncharacterized protein yjcS 3.30.70.900 89 8 77 3.13 4.05
2rilA00 75.34 Antibiotic biosynthesis monooxygenaseShewanella loihica PV-4 3.30.70.900 91 10 78 3.90 4.99
2epiB00 75.31 Methanocaldococcus jannaschiiUPF0045 protein MJ1052 3.30.70.930 96 8 70 3.21 4.59
1rwuA00 74.85 Hypothetical proteinUPF0250 protein ybeDEscherichia coli K-12 3.30.70.1460 87 9 69 3.29 4.76
1lxjA00 74.40 CytoplasmNucleusSaccharomyces cerevisiaeUPF0045 protein ECM15Fungal-type cell wall organization 3.30.70.930 101 7 70 3.12 4.46
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Displaying entries 1 to 20 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1cg2A02
SGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDDKAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNE
DFDAAMKTLEERAQQKKLPEADVKVIVTRG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1cg2A02
SGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDDKAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNE
DFDAAMKTLEERAQQKKLPEADVKVIVTRG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:00

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:00

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:16

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"