CATH Domain: 1ceoA00 XML data for domain: 1ceoA00

Molscript image for 1ceoA00
1ceoA00
PDB coordinates for domain 1ceoA00

PDB 1ceo, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.80 Glycosidases Gene3D
3.20.20.80.44
3.20.20.80.44.1
3.20.20.80.44.1.1
3.20.20.80.44.1.1.1
3.20.20.80.44.1.1.1.1

[top]
Segment boundaries for domain 1ceoA00

Chopping figure for domain 1ceoA00
DomainStart PDB ResidueStop PDB Residue
1ceoA00 1 340

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.20.20.80.44.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1vjzA00 84.74 Endoglucanase [EC:3.2.1.4]Thermotoga maritimaStarch and sucrose metabolismEndoglucanase 3.20.20.80 320 25 88 2.57 2.91
3hn3A03 77.04 Beta-glucuronidaseGlycosaminoglycan degradationGlycosaminoglycan catabolic processMetabolic pathwaysStarch and sucrose metabolism 3.20.20.80 300 14 76 3.58 4.66
1uhvA02 75.57 Thermoanaerobacterium saccharolyticumBeta-xylosidase 3.20.20.80 344 11 81 3.99 4.92
1nofA02 74.31 Erwinia chrysanthemiXylanase 3.20.20.80 276 9 72 3.21 4.44
[1]
Displaying entries 1 to 4 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1ceoA00
MVSFKAGINLGGWISQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKK
YNLGLVLDMHHAPGSTLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEPDSTRWNKLMLECIKAIREIDSTMW
LYIGGNNYNSPDELKNLADIDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMEL
NNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIAIADLESRIKWHEDYISLLEEYDIGGAVWNYKKMDFEIYNEDRK
PVSQELVNILAR
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1ceoA00
MVSFKAGINLGGWISQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKK
YNLGLVLDMHHAPGYRFQDFKTSTLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEPDSTRWNKLMLECIKAI
REIDSTMWLYIGGNNYNSPDELKNLADIDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNP
KYSFMMELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIAIADLESRIKWHEDYISLLEEYDIGGAVWNYKKMDF
EIYNEDRKPVSQELVNILARRKT
BLAST against CATH

[top]
Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "1ceo000" to "1ceoA00" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:23

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"