CATH Domain: 1cdzA00 XML data for domain: 1cdzA00

Molscript image for 1cdzA00
1cdzA00
PDB coordinates for domain 1cdzA00

PDB 1cdz, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.10190 Gene3D
3.40.50.10190.7
3.40.50.10190.7.1
3.40.50.10190.7.1.1
3.40.50.10190.7.1.1.1
3.40.50.10190.7.1.1.1.1

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Segment boundaries for domain 1cdzA00

Chopping figure for domain 1cdzA00
DomainStart PDB ResidueStop PDB Residue
1cdzA00 1 96

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.50.10190.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1imoA00 80.30 DNA ligase 3Reciprocal meiotic recombinationDNA bindingHomo sapiensProtein binding 3.40.50.10190 88 27 79 3.04 3.84
1yqeA02 75.66 Hypothetical proteinArchaeoglobus fulgidusD-tyrosyl-tRNA(Tyr) deacylase 3.40.50.10700 96 4 75 2.99 3.99
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1cdzA00
ELPDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLAFVRPRWIYSCNE
KQKLLPHQLYGVVPQA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1cdzA00
ELPDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLAFVRPRWIYSCNE
KQKLLPHQLYGVVPQA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:46

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"