CATH Domain: 1cc8A00 XML data for domain: 1cc8A00

Molscript image for 1cc8A00
1cc8A00
PDB coordinates for domain 1cc8A00

PDB 1cc8, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.70 Alpha-Beta Plaits
3.30.70.100 Gene3D
3.30.70.100.1
3.30.70.100.1.1
3.30.70.100.1.1.1
3.30.70.100.1.1.1.1
3.30.70.100.1.1.1.1.1

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Segment boundaries for domain 1cc8A00

Chopping figure for domain 1cc8A00
DomainStart PDB ResidueStop PDB Residue
1cc8A00 2 73

Structural Neighbourhood (153 entries)

There are 153 matching structural neighberhood comparisons for CATH ID 3.30.70.100.1.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 153 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2qifA00 91.04 Bacillus subtilisCopper chaperone copZ 3.30.70.100 69 26 90 1.54 1.71
3cjkB00 90.25 Cu2+-exporting ATPase [EC:3.6.3.4]Copper-dependent protein bindingCopper-transporting ATPase 1Cellular copper ion homeostasisTrans-Golgi network 3.30.70.100 75 19 92 1.67 1.82
1yjrA00 89.98 Cu2+-exporting ATPase [EC:3.6.3.4]Copper-dependent protein bindingCopper-transporting ATPase 1Cellular copper ion homeostasisTrans-Golgi network 3.30.70.100 75 19 94 2.02 2.13
1qupA01 89.81 [EC:4.2.-.-]NucleusProtein bindingSuperoxide dismutase copper chaperone activityCytosol 3.30.70.100 68 13 91 1.60 1.75
1osdA00 89.48 Hypothetical periplasmic mercuric ion binding proteinCupriavidus metallidurans CH34 3.30.70.100 72 22 94 2.02 2.14
1mwyA00 89.20 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]Detoxification of zinc ionLead, cadmium, zinc and mercury-transporting ATPaseEscherichia coli K-12Response to cadmium ion 3.30.70.100 73 16 95 1.69 1.76
2xmjA00 88.97 Ssr2857 proteinCopper ion bindingProtein bindingSynechocystis sp. PCC 6803 3.30.70.100 63 22 86 1.63 1.89
3dxsX00 87.75 Cu2+-exporting ATPase [EC:3.6.3.4]Arabidopsis thalianaCopper-transporting ATPase RAN1Regulation of stomatal movementGolgi apparatus 3.30.70.100 66 24 86 1.84 2.14
2kt2A00 86.24 Mercuric reductasePseudomonas aeruginosaMercuric reductase [EC:1.16.1.1] 3.30.70.100 69 18 91 2.36 2.57
2g9oA00 85.83 Cu2+-exporting ATPase [EC:3.6.3.4]Copper-dependent protein bindingCopper-transporting ATPase 1Trans-Golgi networkCellular copper ion homeostasis 3.30.70.100 77 22 90 2.50 2.75
2ofhX00 85.73 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]Zinc-transporting ATPaseSynechocystis sp. PCC 6803 3.30.70.100 71 19 93 2.19 2.35
2f1fA01 85.09 Valine, leucine and isoleucine biosynthesisMetabolic pathwaysButanoate metabolismC5-Branched dibasic acid metabolismPantothenate and CoA biosynthesis 3.30.70.260 79 9 87 2.59 2.97
1vi7A02 84.94 IMPACT family member yigZProtein bindingEscherichia coli K-12 3.30.70.240 71 9 91 2.66 2.90
1y3jA00 84.90 Cu2+-exporting ATPase [EC:3.6.3.4]Copper-dependent protein bindingCopper-transporting ATPase 1Cellular copper ion homeostasisTrans-Golgi network 3.30.70.100 77 19 89 2.03 2.27
1y7pB01 84.69 Archaeoglobus fulgidusUncharacterized protein AF_1403 3.30.70.260 80 11 87 2.62 2.99
1opzA00 84.58 Cu2+-exporting ATPase [EC:3.6.3.4]Bacillus subtilisCopper-exporting P-type ATPase A 3.30.70.100 76 29 92 2.17 2.36
1vr6A01 84.40 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysThermotoga maritima3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]Phospho-2-dehydro-3-deoxyheptonate aldolase 3.30.70.1140 75 12 85 2.51 2.94
1u0sA00 84.32 Thermotoga maritimaBacterial chemotaxisTwo-component systemTwo-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]Protein binding 3.30.70.1110 86 13 80 2.40 2.99
1q5yD00 84.24 CopG family transcriptional regulator, nickel-responsive regulatorNickel-responsive regulatorProtein bindingEscherichia coli K-12 3.30.70.1150 80 5 85 2.52 2.96
2nyiA01 83.74 3.30.70.260 77 8 88 2.76 3.13
1nh8A03 83.54 Histidine metabolismMetabolic pathwaysATP phosphoribosyltransferaseATP phosphoribosyltransferase [EC:2.4.2.17]Mycobacterium tuberculosis 3.30.70.120 67 2 84 2.69 3.18
1in0A01 83.53 Hypothetical proteinHaemophilus influenzaeUPF0234 protein HI_1034 3.30.70.860 70 8 90 2.30 2.55
1earA02 83.45 Sporosarcina pasteuriiUrease accessory protein ureE 3.30.70.790 69 13 81 3.66 4.47
2nzcA00 83.32 Thermotoga maritimaPutative uncharacterized protein 3.30.70.1150 77 9 85 3.09 3.60
1konA03 83.32 UPF0082 protein yebCEscherichia coli K-12 3.30.70.980 75 9 85 2.96 3.47
3ce8A00 83.31 Shewanella baltica OS155Putative uncharacterized protein 3.30.70.120 87 5 78 2.55 3.26
2vd3A03 83.17 Methanothermobacter thermautotrophicus str. Delta HATP phosphoribosyltransferaseATP phosphoribosyltransferase [EC:2.4.2.17]Histidine metabolismMetabolic pathways 3.30.70.120 74 8 81 2.27 2.80
2x3dF01 83.16 Hypothetical proteinSulfolobus solfataricusPutative uncharacterized protein 3.30.70.1340 84 19 83 2.71 3.25
1sc6A03 82.77 Glycine, serine and threonine metabolismMetabolic pathwaysD-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]D-3-phosphoglycerate dehydrogenaseEscherichia coli K-12 3.30.70.260 79 11 86 3.09 3.59
2qmwA03 82.63 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysPrephenate dehydratase [EC:4.2.1.51]Similar to chorismate mutaseStaphylococcus aureus subsp. aureus Mu50 3.30.70.260 73 9 84 3.04 3.58
1harA02 82.55 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 69 10 80 2.84 3.53
1u8sA01 82.40 Glycine cleavage system transcriptional repressor, putativeGlycine cleavage system transcriptional repressorVibrio cholerae 3.30.70.260 86 11 80 2.37 2.95
1nm2A01 82.27 Fatty acid biosynthesisStreptomyces coelicolorMalonyl CoA:acyl carrier protein malonyltransferase[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]Metabolic pathways 3.30.70.250 68 11 84 2.48 2.93
1gmuA01 82.21 Klebsiella aerogenesUrease accessory protein ureE 3.30.70.790 67 7 79 2.67 3.37
2w25A02 81.67 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory proteinLeucine-responsive regulatory proteinMycobacterium tuberculosis 3.30.70.920 81 5 80 2.66 3.31
1vjqA00 81.63 3.30.70.340 71 11 88 3.25 3.66
1mw7A03 81.46 Helicobacter pyloriUPF0082 protein HP_0162 3.30.70.980 75 2 90 3.24 3.57
1eayD00 81.46 Bacterial chemotaxisTwo-component systemTwo-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]Escherichia coli K-12Chemotaxis protein cheA 3.30.70.400 69 10 90 3.18 3.52
2nyiA02 81.21 3.30.70.260 89 16 78 2.65 3.37
2oauA03 81.00 Small conductance mechanosensitive ion channel, MscS familySmall-conductance mechanosensitive channelMechanically-gated ion channel activityIntegral to membraneEscherichia coli K-12 3.30.70.100 86 12 74 2.49 3.35
3bzqA00 80.86 Two-component systemNitrogen regulatory protein P-II 1Nitrogen regulatory protein P-IIMycobacterium tuberculosis 3.30.70.120 99 13 67 2.52 3.72
2ivyA01 80.85 Sulfolobus solfataricusPutative uncharacterized protein 3.30.70.240 74 12 83 3.11 3.71
1no8A00 80.67 THO complex subunit 4Mus musculusSpliceosomeSingle-stranded DNA bindingRNA binding 3.30.70.330 78 4 84 3.39 4.01
1gxuA00 80.62 Carbamoyltransferase hypFHydrogenase maturation protein HypFEscherichia coli K-12 3.30.70.100 88 9 78 2.46 3.14
2hiyB01 80.41 Streptococcus pneumoniaePutative uncharacterized protein 3.30.70.1280 87 13 78 3.43 4.39
1l3kA02 80.31 Heterogeneous nuclear ribonucleoprotein A1NucleolusProtein bindingCytoplasmSpliceosome 3.30.70.330 78 9 87 3.27 3.75
1cvjA01 80.25 Poly(A) RNA bindingTranslation activator activityProtein C-terminus bindingMRNA polyadenylationPolyadenylate-binding protein 1 3.30.70.330 77 4 87 3.17 3.64
3cj8B02 80.21 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117]Lysine biosynthesisMetabolic pathwaysEnterococcus faecalis 3.30.70.250 66 7 76 2.75 3.60
2do0A01 80.20 Protein domain specific bindingIntegral to plasma membraneParaspecklesAlternative nuclear mRNA splicing, via spliceosomeHeterogeneous nuclear ribonucleoprotein M 3.30.70.330 76 8 88 3.33 3.78
1u8sA02 80.19 Glycine cleavage system transcriptional repressor, putativeGlycine cleavage system transcriptional repressorVibrio cholerae 3.30.70.260 84 5 85 3.20 3.73
1i1gA02 80.15 Pyrococcus furiosusHTH-type transcriptional regulator lrpALrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA 3.30.70.920 77 12 84 3.43 4.06
1lfpA03 80.09 UPF0082 protein aq_1575Aquifex aeolicus 3.30.70.980 73 8 87 3.02 3.44
2rhsD06 80.06 Aminoacyl-tRNA biosynthesisStaphylococcus haemolyticus JCSC1435Phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]Phenylalanyl-tRNA synthetase beta chain 3.30.70.380 88 8 72 2.59 3.56
3c19A01 80.03 Methanopyrus kandleriUncharacterized conserved protein 3.30.70.1380 98 6 70 2.24 3.18
1utaA00 80.02 Membrane fractionCell cycle cytokinesisCell division protein FtsNCell division protein ftsNProtein binding 3.30.70.1070 77 12 87 2.90 3.33
1fxlA02 79.99 AU-rich element bindingELAV like protein 2/3/4MRNA processingHomo sapiensELAV-like protein 4 3.30.70.330 77 5 83 3.25 3.91
2nuhA00 79.98 Xylella fastidiosaPeriplasmic divalent cation tolerance proteinPeriplasmic divalent cation tolerance protein 3.30.70.830 104 4 66 2.35 3.54
2hfvA01 79.93 Rhodopseudomonas palustrisPutative uncharacterized protein 3.30.70.790 77 6 83 2.98 3.59
2fmrA00 79.89 CytoplasmSoluble fractionNucleolusHomo sapiensFragile X mental retardation 1 protein 3.30.1370.10 65 21 81 3.35 4.09
1s1tA02 79.80 HIV-1 M:B_HXB2RGag-Pol polyprotein 3.30.70.270 93 11 75 3.42 4.54
1u7lA03 79.67 V-type H+-transporting ATPase subunit C [EC:3.6.3.14]Vacuolar acidificationOxidative phosphorylationVacuolar proton-transporting V-type ATPase, V1 domainProtein binding 3.30.70.100 90 9 73 2.87 3.91
1darA05 79.67 Thermus thermophilus HB8Elongation factor GElongation factor EF-G [EC:3.6.5.3] 3.30.70.240 87 9 75 2.71 3.57
2vh7A00 79.65 Acylphosphatase activityAcylphosphatase-1Pyruvate metabolismHomo sapiensPhosphate metabolic process 3.30.70.100 94 5 71 2.61 3.66
2pehA01 79.65 Splicing factor 45SpliceosomeHomo sapiensProtein bindingSplicing factor 45 3.30.70.330 83 9 83 3.52 4.23
2dclA00 79.61 Pyrococcus horikoshiiUPF0166 protein PH1503 3.30.70.120 99 8 69 2.76 3.96
2fgcA03 79.60 Butanoate metabolismC5-Branched dibasic acid metabolismPantothenate and CoA biosynthesisValine, leucine and isoleucine biosynthesisMetabolic pathways 3.30.70.1150 74 11 86 3.70 4.28
1xmbA02 79.54 Auxin metabolic processArabidopsis thalianaIAA-Ala conjugate hydrolase activityIAA-amino acid hydrolase ILR1-like 2 3.30.70.360 101 11 70 2.50 3.56
1nzaA00 79.49 Thermus thermophilus HB8Divalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 103 15 66 2.25 3.41
2i0xA01 79.33 Pyrococcus furiosusPutative uncharacterized protein 3.30.70.240 66 15 81 3.17 3.87
1s99A02 79.33 Bacillus subtilisPutative HMP/thiamine-binding protein ykoF 3.30.70.930 81 6 81 3.63 4.46
1uv7A00 79.28 Vibrio choleraeGeneral secretion pathway protein M 3.30.1360.100 74 9 74 2.89 3.89
2epiB00 79.25 Methanocaldococcus jannaschiiUPF0045 protein MJ1052 3.30.70.930 96 11 68 2.41 3.51
2gx8C02 79.21 Bacillus cereus ATCC 14579NIF3-related protein 3.30.70.830 102 11 67 2.55 3.77
1dloB02 79.21 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 93 12 75 3.48 4.62
2ia0B02 79.20 Pyrococcus furiosusUncharacterized HTH-type transcriptional regulator PF0864 3.30.70.920 99 9 66 2.25 3.38
1xtzA02 79.06 Identical protein bindingNucleusRibose-5-phosphate isomerasePyridoxine biosynthetic processRibose 5-phosphate isomerase A [EC:5.3.1.6] 3.30.70.260 84 13 77 3.56 4.60
1fxlA01 79.06 AU-rich element bindingELAV like protein 2/3/4MRNA processingHomo sapiensELAV-like protein 4 3.30.70.330 71 2 81 3.10 3.78
2rb7A02 78.90 Peptidase, M20/M25/M40 familyDesulfovibrio desulfuricans subsp. desulfuricans str. G20 3.30.70.360 98 5 69 2.92 4.21
1b4bA00 78.66 Geobacillus stearothermophilusArginine repressor 3.30.1360.40 71 5 75 3.71 4.95
3bguA01 78.52 Thermobifida fusca YXPutative uncharacterized protein 3.30.70.900 95 8 72 3.13 4.31
1dj0A02 78.40 TRNA pseudouridine synthesisTRNA pseudouridine synthase ATRNA bindingPseudouridine synthase activityTRNA pseudouridine synthase A [EC:5.4.99.12] 3.30.70.580 107 12 67 2.90 4.31
2j8sA06 78.39 Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 familyAcriflavine resistance protein BProtein bindingEscherichia coli K-12 3.30.70.1430 105 11 65 2.58 3.93
2u1aA00 78.33 U1 small nuclear ribonucleoprotein ASpliceosomeSpliceosomal complexHomo sapiensProtein binding 3.30.70.330 88 2 79 3.57 4.49
1qm9A02 78.31 Polypyrimidine tract-binding protein 1Poly-pyrimidine tract bindingHeterogeneous nuclear ribonucleoprotein complexMRNA processingNucleolus 3.30.70.330 89 2 79 3.68 4.61
3e3xA02 78.20 Vibrio parahaemolyticusBipAGTP-binding protein 3.30.70.240 83 6 73 3.01 4.10
2rilA00 78.19 Antibiotic biosynthesis monooxygenaseShewanella loihica PV-4 3.30.70.900 91 4 78 3.54 4.54
1xxaC00 78.18 Transcriptional regulator of arginine metabolismArginine repressorEscherichia coli K-12Plasmid recombination 3.30.1360.40 73 8 72 3.38 4.66
3proC02 78.14 Lysobacter enzymogenesAlpha-lytic protease 3.30.300.50 70 7 87 4.08 4.66
1jqgA01 78.07 Carboxypeptidase AHelicoverpa armigera 3.30.70.340 91 12 71 2.74 3.84
2j8sA02 78.01 Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 familyAcriflavine resistance protein BProtein bindingEscherichia coli K-12 3.30.70.1430 103 2 68 3.14 4.56
2ifxA01 77.97 Ralstonia eutropha JMP134Putative uncharacterized protein 3.30.70.100 82 8 82 3.79 4.57
2pgcA01 77.90 3.30.70.900 95 6 73 3.30 4.48
1vk8A00 77.79 Thermotoga maritimaPutative uncharacterized protein 3.30.70.930 91 6 71 2.79 3.91
3bn7A00 77.76 Caulobacter vibrioidesPutative uncharacterized protein 3.30.70.900 96 5 75 3.50 4.67
3dlkB02 77.74 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 98 16 70 3.50 4.97
2fb0A00 77.63 Bacteroides thetaiotaomicronPutative uncharacterized protein 3.30.70.900 91 5 78 3.60 4.61
1tr0A00 77.52 Populus tremulaStable protein 1 3.30.70.900 106 6 66 2.83 4.23
2qfjA02 77.48 Homo sapiensPoly(U)-binding-splicing factor PUF60Protein binding 3.30.70.330 87 5 74 3.19 4.27
2bbeA00 77.48 Shewanella oneidensisPutative uncharacterized protein 3.30.70.900 92 1 77 3.41 4.42
2pn6A02 77.45 150aa long hypothetical transcriptional regulatorSulfolobus tokodaii 3.30.70.920 98 12 70 2.98 4.23
1lfwA03 77.42 Lactobacillus delbrueckii subsp. lactisBeta-Ala-Xaa dipeptidase 3.30.70.360 88 4 70 2.96 4.20
1m1hA01 77.36 Transcriptional antiterminator NusGTranscription antitermination protein nusGAquifex aeolicus 3.30.70.940 100 15 69 3.11 4.51
1kr4A00 77.33 Thermotoga maritimaDivalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 107 8 64 2.91 4.51
2dy1A03 77.31 Thermus thermophilus HB8Elongation factor EF-G [EC:3.6.5.3]Elongation factor G (EF-G-2) 3.30.70.870 76 12 85 4.13 4.83
1uw4A00 77.22 Regulator of nonsense transcripts 3BNuclear-transcribed mRNA catabolic process, nonsense-mediated decayHomo sapiensProtein binding 3.30.70.330 90 2 74 2.99 4.02
2vooA02 77.21 TRNA modificationNucleolusMRNA bindingProtein bindingLupus La protein 3.30.70.330 89 11 77 3.57 4.60
2hzcA00 77.19 Splicing factor U2AF 65 kDa subunitSpliceosomeSpliceosomal complexSplicing factor U2AF 65 kDa subunitEnzyme binding 3.30.70.330 87 5 81 3.72 4.56
2qmxA03 77.17 Prephenate dehydratase [EC:4.2.1.51]Phenylalanine, tyrosine and tryptophan biosynthesisChlorobaculum tepidumMetabolic pathwaysPrephenate dehydratase 3.30.70.260 90 5 77 2.97 3.82
1rk8A00 77.16 SpliceosomeRNA-binding protein 8AMicrotubule cytoskeleton organizationNucleusDrosophila melanogaster 3.30.70.330 87 6 80 3.59 4.46
1kn6A00 77.10 Mus musculusPeptide hormone processingSerine-type endopeptidase activityNeuroendocrine convertase 1Proprotein convertase subtilisin/kexin type 1 [EC:3.4.21.93] 3.30.70.850 73 5 82 3.66 4.45
1pytA00 76.98 Bos taurusCarboxypeptidase A1 [EC:3.4.17.1]Carboxypeptidase A1 3.30.70.340 94 8 76 3.49 4.56
2x1fA00 76.95 Protein heterodimerization activityMRNA 3'-end-processing protein RNA15MRNA polyadenylationSaccharomyces cerevisiaeMRNA cleavage 3.30.70.330 94 4 72 3.48 4.81
1x7vC00 76.74 Pseudomonas aeruginosaPutative uncharacterized protein 3.30.70.900 97 6 73 3.61 4.93
2pgcA02 76.66 3.30.70.900 102 4 70 3.21 4.55
3bv8A00 76.63 Lysine biosynthesisMetabolic pathways2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferaseTetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117] 3.30.70.250 84 6 65 2.64 4.03
1lwcB02 76.61 HIV-1 M:B_HXB2RGag-Pol polyprotein 3.30.70.270 87 13 79 3.44 4.34
2zd1A02 76.55 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 94 12 71 3.50 4.91
1jmtA00 76.50 Spliceosomal complexSplicing factor U2AF 35 kDa subunitCajal bodyHomo sapiensProtein binding 3.30.70.330 98 5 71 3.50 4.90
1b7yB06 76.47 Aminoacyl-tRNA biosynthesisPhenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]Phenylalanyl-tRNA synthetase beta chainThermus thermophilus 3.30.70.380 86 5 72 2.91 4.04
1vgyA02 76.44 Succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]Neisseria meningitidis serogroup BLysine biosynthesisMetabolic pathwaysSuccinyl-diaminopimelate desuccinylase 3.30.70.360 114 6 60 2.55 4.21
1mwqA00 76.41 Hypothetical proteinHaemophilus influenzaeUncharacterized protein HI_0828 3.30.70.1060 98 5 72 2.78 3.84
1cvjG02 76.36 Poly(A) RNA bindingProtein C-terminus bindingTranslation activator activityMRNA polyadenylationPolyadenylate-binding protein 1 3.30.70.330 88 5 78 3.62 4.62
1ayeA01 76.20 Carboxypeptidase A2 [EC:3.4.17.15]Homo sapiensMetallocarboxypeptidase activityVacuolar protein catabolic processCarboxypeptidase A2 3.30.70.340 99 2 67 3.15 4.65
2j8sA07 76.17 Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 familyAcriflavine resistance protein BProtein bindingEscherichia coli K-12 3.30.70.1440 94 8 75 3.77 4.99
1x5uA01 76.13 SpliceosomeSpliceosomal complexHomo sapiensSplicing factor 3B subunit 4Splicing factor 3B subunit 4 3.30.70.330 80 6 82 3.98 4.82
1rwuA00 76.00 Hypothetical proteinUPF0250 protein ybeDEscherichia coli K-12 3.30.70.1460 87 12 78 3.29 4.21
1d8zA00 75.98 Mus musculusAU-rich element bindingELAV like protein 2/3/4ELAV-like protein 3 3.30.70.330 89 5 76 3.41 4.46
1l3kA01 75.91 Heterogeneous nuclear ribonucleoprotein A1NucleolusProtein bindingCytoplasmSpliceosome 3.30.70.330 84 6 78 3.54 4.51
2o5aA01 75.85 Hypothetical proteinBacillus haloduransBH1328 protein 3.30.460.10 101 5 57 2.87 5.00
1cg2A02 75.71 Pseudomonas sp. RS-16Carboxypeptidase G2 3.30.70.360 110 5 65 2.66 4.06
1s99A01 75.69 Bacillus subtilisPutative HMP/thiamine-binding protein ykoF 3.30.70.930 77 9 85 3.67 4.28
1q8kA03 75.67 Translation initiation factor activityTranslation initiation factor eIF-2 alpha subunitEukaryotic translation initiation factor 2 subunit 1PolysomeHomo sapiens 3.30.70.1130 116 12 56 2.35 4.13
1j27A00 75.66 Hypothetical proteinThermus thermophilusPutative uncharacterized protein 3.30.70.1120 98 1 65 2.93 4.49
2errA01 75.57 Fox-1 homolog AProtein C-terminus bindingHomo sapiensTrans-Golgi network 3.30.70.330 83 5 80 3.50 4.34
1iujB00 75.52 TT1380 proteinThermus thermophilus 3.30.70.900 103 4 67 3.20 4.71
1z2lA02 75.51 Purine metabolismZinc ion bindingProtein homodimerization activityAllantoate deiminase [EC:3.5.3.9]Manganese ion binding 3.30.70.360 115 4 60 2.59 4.25
1ru0B00 75.48 Pterin-4-alpha-carbinolamine dehydratase 2Phenylalanine 4-monooxygenase activityNucleusProtein heterooligomerizationProtein binding 3.30.1360.20 98 6 57 2.70 4.72
2fyxA00 75.44 Putative transposaseTransposase, putativeDeinococcus radiodurans 3.30.70.1290 130 6 53 2.49 4.62
1in0A02 75.44 Hypothetical proteinHaemophilus influenzaeUPF0234 protein HI_1034 3.30.70.990 92 5 66 3.04 4.58
2v8hA02 75.43 Beta-alanine synthaseLachancea kluyveri 3.30.70.360 116 8 56 2.60 4.57
1mlaA01 75.11 Fatty acid biosynthesisMetabolic pathwaysMalonyl CoA-acyl carrier protein transacylase[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]Escherichia coli K-12 3.30.70.250 73 6 95 3.57 3.72
1nz8A00 75.10 Thermus thermophilus HB8Transcriptional antiterminator NusGTranscription antitermination protein nusG 3.30.70.940 119 13 59 2.69 4.51
1r8hA00 75.07 Human papillomavirus type 6aRegulatory protein E2 3.30.70.330 87 12 73 3.48 4.73
2dgsA01 75.04 CytoplasmDAZ-associated protein 1NucleusRNA bindingHomo sapiens 3.30.70.330 89 4 78 3.72 4.73
1f0xA04 75.01 Pyruvate metabolismD-lactate dehydrogenaseNAD or NADH bindingEscherichia coli K-12D-lactate dehydrogenase [EC:1.1.1.28] 3.30.1370.20 85 2 74 3.41 4.60
1lfwA02 74.72 Lactobacillus delbrueckii subsp. lactisBeta-Ala-Xaa dipeptidase 3.30.70.360 106 8 66 3.12 4.72
3ct9A02 74.65 Bacteroides thetaiotaomicronAcetylornithine deacetylase 3.30.70.360 104 11 61 2.82 4.58
1ufwA00 74.59 Phosphatidylinositol signaling systemSynaptojanin-2Phosphatidylinositol-bisphosphatase [EC:3.1.3.36]Homo sapiensInositol phosphate metabolism 3.30.70.330 95 9 71 3.54 4.95
1n0uA05 73.97 Positive regulation of translational elongationTranslation elongation factor activityElongation factor 2Elongation factor EF-2 [EC:3.6.5.3]Saccharomyces cerevisiae 3.30.70.240 112 11 58 2.67 4.60
1nxiA00 73.85 Hypothetical proteinVibrio choleraePutative uncharacterized protein 3.30.70.970 132 6 47 2.25 4.71
1qd1A02 73.54 Formimidoyltransferase-cyclodeaminaseOne carbon pool by folateSus scrofaFormiminotetrahydrofolate cyclodeaminase [EC:4.3.1.4]Glutamate formiminotransferase [EC:2.1.2.5] 3.30.70.670 139 9 48 2.20 4.50
5rubA01 72.86 Ribulose bisphosphate carboxylaseRhodospirillum rubrum 3.30.70.150 121 6 59 2.93 4.92
2bopA00 72.36 Regulatory protein E2Bovine papillomavirus type 1 3.30.70.330 85 8 77 3.59 4.62
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Displaying entries 1 to 153 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1cc8A00
AEIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGKQL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1cc8A00
MAEIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGKQL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:59

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:59

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:26

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"