CATH Domain: 1c3cA03 XML data for domain: 1c3cA03

Molscript image for 1c3cA03
1c3cA03
PDB coordinates for domain 1c3cA03

PDB 1c3c, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.40 Ribonucleotide Reductase Protein R1; domain 1
1.10.40.30 Fumarase/aspartase (C-terminal domain) Gene3D
1.10.40.30.4
1.10.40.30.4.1
1.10.40.30.4.1.1
1.10.40.30.4.1.1.1
1.10.40.30.4.1.1.1.1

[top]
Segment boundaries for domain 1c3cA03

Chopping figure for domain 1c3cA03
DomainStart PDB ResidueStop PDB Residue
1c3cA01 2 92
1c3cA02 93 348
1c3cA03 349 429

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 1.10.40.30.4.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1q5nA03 91.14 3-carboxy-cis,cis-muconate cycloisomeraseBenzoate degradation via hydroxylation3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]Metabolic pathwaysAcinetobacter sp. ADP1 1.10.40.30 81 20 98 2.08 2.11
1tj7A03 84.30 Arginine and proline metabolismAlanine, aspartate and glutamate metabolismMetabolic pathwaysArgininosuccinate lyase [EC:4.3.2.1]Argininosuccinate lyase 1.10.40.30 71 18 86 2.74 3.17
1furA03 80.74 Citrate cycle (TCA cycle)Metabolic pathwaysFumarate hydratase class IIFumarate hydratase, class II [EC:4.2.1.2]Escherichia coli K-12 1.10.40.30 52 11 64 1.92 2.99
1jswB03 80.39 Nitrogen metabolismMetabolic pathwaysAlanine, aspartate and glutamate metabolismMembraneProtein binding 1.10.40.30 50 16 61 1.93 3.13
1rj9A01 79.82 Cell division protein ftsYThermus aquaticusProtein binding 1.20.120.140 81 8 65 2.84 4.34
1j3uA03 78.13 Bacillus sp. YM55-1Aspartase 1.10.40.30 52 13 64 2.63 4.10
1dofA03 76.06 Pyrobaculum aerophilumAdenylosuccinate lyase [EC:4.3.2.2]Purine metabolismAdenylosuccinate lyase (PurB)Alanine, aspartate and glutamate metabolism 1.10.40.30 56 16 61 2.72 4.41
[1]
Displaying entries 1 to 7 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1c3cA03
KGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEYLLEDEEVKKLVTKEELEELFDISYYLKHVDHIFERF
E
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1c3cA03
KGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEYLLEDEEVKKLVTKEELEELFDISYYLKHVDHIFERF
E
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:14

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"