Set cath from cathlist by auto on 05 Mar 2006 19:20
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
CATH Domain: 1c30A08
1c30A08
PDB 1c30, Chain A, Domain 8
| CATH Code | Level Description | Links |
|---|---|---|
 3
| Alpha Beta | |
 3.40
| 3-Layer(aba) Sandwich | |
 3.40.50
| Rossmann fold | |
 3.40.50.1380
| Gene3D | |
 3.40.50.1380.4
| ||
 3.40.50.1380.4.1
| ||
 3.40.50.1380.4.1.1
| ||
 3.40.50.1380.4.1.1.1
| ||
 3.40.50.1380.4.1.1.1.1
|
Segment boundaries for domain 1c30A08
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1c30A01 | 1 | 116 |
| 1c30A02 | 117 | 140 |
| 1c30A02 | 211 | 403 |
| 1c30A03 | 141 | 210 |
| 1c30A04 | 404 | 553 |
| 1c30A05 | 554 | 663 |
| 1c30A06 | 664 | 686 |
| 1c30A06 | 757 | 936 |
| 1c30A07 | 687 | 756 |
| 1c30A08 | 937 | 1073 |
Structural Neighbourhood (1 entries)
There are 1 matching structural neighberhood comparisons for CATH ID 3.40.50.1380.4.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 1 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
|
1a9xA08 | 93.70 | 3.40.50.1380 | 106 | 100 | 77 | 0.20 | 0.26 |
[1]
Displaying entries 1 to 1 (page 1 of 1)
Domain ATOM Sequence
>pdb|1c30A08 STMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINT TSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
Domain History Events (3)
Flow stage update by auto on 05 Mar 2006 19:20
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
Insertion by auto on 05 Mar 2006 16:14
PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"
