CATH Domain: 1c0pA02 XML data for domain: 1c0pA02

Molscript image for 1c0pA02
1c0pA02
PDB coordinates for domain 1c0pA02

PDB 1c0p, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.9 D-Amino Acid Oxidase; Chain A, domain 2
3.30.9.10 D-Amino Acid Oxidase, subunit A, domain 2 Gene3D
3.30.9.10.1
3.30.9.10.1.1
3.30.9.10.1.1.1
3.30.9.10.1.1.1.1
3.30.9.10.1.1.1.1.1

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Segment boundaries for domain 1c0pA02

Chopping figure for domain 1c0pA02
DomainStart PDB ResidueStop PDB Residue
1c0pA01 999 1076
1c0pA01 1138 1185
1c0pA01 1289 1361
1c0pA02 1077 1136
1c0pA02 1186 1288

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.30.9.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3g3eA02 86.07 PeroxisomeArginine and proline metabolismD-amino-acid oxidase [EC:1.4.3.3]Glycine, serine and threonine metabolismD-amino-acid oxidase activity 3.30.9.10 141 23 82 3.26 3.97
1ryiA02 80.70 Glycine oxidase [EC:1.4.3.19]Thiamine metabolismBacillus subtilisGlycine oxidase 3.30.9.10 140 19 77 3.44 4.45
2gf3A02 73.96 Monomeric sarcosine oxidaseBacillus sp. B-0618 3.30.9.10 195 15 77 3.87 4.96
2uzzA02 72.58 N-methyl-L-tryptophan oxidase [EC:1.5.3.-]N-methyl-L-tryptophan oxidaseEscherichia coli K-12N-methyl-L-amino-acid oxidase activity 3.30.9.10 191 11 78 3.76 4.79
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1c0pA02
KWVELVPTGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSECPPGAIGVTYDTLSIAGIDDQAAEPIRGQTVLVK
SPCKRCTMDSSDPASPAYIIPRPGGEVICGGTYGVGDWDLSVNPETVQRILKHCLRLDPTISSDGTIEGIEVLRHNVGLR
PAR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1c0pA02
KWVELVPTGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSECPPGAIGVTYDTLSIAGIDDQAAEPIRGQTVLVK
SPCKRCTMDSSDPASPAYIIPRPGGEVICGGTYGVGDWDLSVNPETVQRILKHCLRLDPTISSDGTIEGIEVLRHNVGLR
PAR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:58

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:58

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:14

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"