CATH Domain: 1c0pA01 XML data for domain: 1c0pA01

Molscript image for 1c0pA01
1c0pA01
PDB coordinates for domain 1c0pA01

PDB 1c0p, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.720 NAD(P)-binding Rossmann-like Domain Gene3D
3.40.50.720.1
3.40.50.720.1.1
3.40.50.720.1.1.1
3.40.50.720.1.1.1.1
3.40.50.720.1.1.1.1.1

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Segment boundaries for domain 1c0pA01

Chopping figure for domain 1c0pA01
DomainStart PDB ResidueStop PDB Residue
1c0pA01 999 1076
1c0pA01 1138 1185
1c0pA01 1289 1361
1c0pA02 1077 1136
1c0pA02 1186 1288

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.40.50.720.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3g3eA01 87.95 PeroxisomeArginine and proline metabolismD-amino-acid oxidase [EC:1.4.3.3]Glycine, serine and threonine metabolismD-amino-acid oxidase activity 3.40.50.720 199 26 84 1.64 1.93
1fl2A01 78.86 Alkyl hydroperoxide reductase subunit F [EC:1.6.4.-]Alkyl hydroperoxide reductase subunit FProtein bindingEscherichia coli K-12Cytosol 3.50.50.60 186 11 72 3.21 4.41
3c4nA01 78.55 Deinococcus radioduransPutative uncharacterized protein 3.50.50.60 233 15 67 3.31 4.88
3c4aA01 77.53 Chromobacterium violaceumProbable tryptophan hydroxylase vioD 3.50.50.60 213 11 60 2.92 4.86
1cjcA01 75.06 Flavin adenine dinucleotide bindingBos taurusSteroid biosynthetic processFerredoxin-NADP+ reductase activityNADP or NADPH binding 3.40.50.720 214 10 60 2.93 4.82
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1c0pA01
LMMHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKHA
PKYCQYLARELQKLGATFERRTVTSLEQAFDGADLVVNATGLGAKSRGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKE
KEVTLVHAYGFSSAGYQQSWGAAEDVAQLVDEAFQRYHG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1c0pA01
LMMHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKHA
PKYCQYLARELQKLGATFERRTVTSLEQAFDGADLVVNATGLGAKSRGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKE
KEVTLVHAYGFSSAGYQQSWGAAEDVAQLVDEAFQRYHG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:16

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:16

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:14

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"