CATH Domain: 1bvyF00 XML data for domain: 1bvyF00

Molscript image for 1bvyF00
1bvyF00
PDB coordinates for domain 1bvyF00

PDB 1bvy, Chain F, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.360 Gene3D
3.40.50.360.20
3.40.50.360.20.1
3.40.50.360.20.1.1
3.40.50.360.20.1.1.1
3.40.50.360.20.1.1.1.1

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Segment boundaries for domain 1bvyF00

Chopping figure for domain 1bvyF00
DomainStart PDB ResidueStop PDB Residue
1bvyF00 479 630

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.40.50.360.20.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1e5dA01 82.95 Desulfovibrio gigasRubredoxin-oxygen oxidoreductase 3.40.50.360 143 14 90 2.92 3.22
3d7nA00 78.64 Agrobacterium tumefaciens str. C58Flavodoxin, WrbA-like protein 3.40.50.360 153 15 92 3.95 4.26
1srrC00 77.40 Sporulation initiation phosphotransferase FTwo-component system, response regulator, stage 0 sporulation protein FBacillus subtilisTwo-component system 3.40.50.2300 121 13 75 3.61 4.81
3gl9B00 75.09 Thermotoga maritimaResponse regulatorTwo-component system, unclassified family, response regulatorProtein binding 3.40.50.2300 118 8 75 3.69 4.92
1gtzA00 75.09 Phenylalanine, tyrosine and tryptophan biosynthesis3-dehydroquinate dehydratase II [EC:4.2.1.10]Streptomyces coelicolor3-dehydroquinate dehydrataseMetabolic pathways 3.40.50.9100 149 10 80 3.83 4.73
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1bvyF00
NTPLLVLYGSNMGTAEGTARDLADIAMSKGFAPQVATLDSHAGNLPREGAVLIVTASYNGHPPDNAKQFVDWLDQASADE
VKGVRYSVFGCGDKNWATTYQKVPAFIDETLAAKGAENIADRGEADASDDFEGTYEEWREHMWSDVAAYFNL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1bvyF00
NTPLLVLYGSNMGTAEGTARDLADIAMSKGFAPQVATLDSHAGNLPREGAVLIVTASYNGHPPDNAKQFVDWLDQASADE
VKGVRYSVFGCGDKNWATTYQKVPAFIDETLAAKGAENIADRGEADASDDFEGTYEEWREHMWSDVAAYFNL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:15

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:15

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:38

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"