CATH Domain: 1bkzA00 XML data for domain: 1bkzA00

Molscript image for 1bkzA00
1bkzA00
PDB coordinates for domain 1bkzA00

PDB 1bkz, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.200 Gene3D
2.60.120.200.43
2.60.120.200.43.1
2.60.120.200.43.1.1
2.60.120.200.43.1.1.1
2.60.120.200.43.1.1.1.1

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Segment boundaries for domain 1bkzA00

Chopping figure for domain 1bkzA00
DomainStart PDB ResidueStop PDB Residue
1bkzA00 1 135

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.60.120.200.43.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1hlcA00 88.39 Galectin-2Homo sapiensGalectin-2 2.60.120.200 129 27 94 1.76 1.86
1y4wA02 77.41 Aspergillus awamoriExo-inulinase 2.60.120.560 162 6 78 3.63 4.63
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1bkzA00
SNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPF
QRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1bkzA00
SNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPF
QRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:46

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:46

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:06

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"