CATH Domain: 1bgvA02 XML data for domain: 1bgvA02

Molscript image for 1bgvA02
1bgvA02
PDB coordinates for domain 1bgvA02

PDB 1bgv, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.192 Leucine Dehydrogenase; Chain A, domain 1
3.40.192.10 Leucine Dehydrogenase, chain A, domain 1 Gene3D
3.40.192.10.2
3.40.192.10.2.1
3.40.192.10.2.1.1
3.40.192.10.2.1.1.1
3.40.192.10.2.1.1.1.1

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Segment boundaries for domain 1bgvA02

Chopping figure for domain 1bgvA02
DomainStart PDB ResidueStop PDB Residue
1bgvA01 207 373
1bgvA02 52 187
1bgvA03 1 51
1bgvA03 425 449

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.192.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gtmA01 91.67 Nitrogen metabolismPyrococcus furiosusGlutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]Arginine and proline metabolismGlutamate dehydrogenase 3.40.192.10 146 37 90 1.05 1.16
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1bgvA02
VIPERVIEFRVPWEDDNGKVHVNTGYRVQFNGAIGPYKGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFD
PNGKSDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1bgvA02
VIPERVIEFRVPWEDDNGKVHVNTGYRVQFNGAIGPYKGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFD
PNGKSDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGF
BLAST against CATH

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Domain History Events (2)

Domain assigned by lewis on 09 Aug 2006 17:12

Automatically fixing a bunch of choppings that have domains with misordered segments. Here the domain is being reassigned back to its original superfamily. This work is done under ticket:98.

Insertion by lewis on 09 Aug 2006 17:11

Automatically fixing a bunch of choppings that have domains with misordered segments. Here the chopping is being reinserted but with the segments reordered in the domains. The domains should not be reordered. This work is done under ticket:98.