CATH Domain: 1bf6A00 XML data for domain: 1bf6A00

Molscript image for 1bf6A00
1bf6A00
PDB coordinates for domain 1bf6A00

PDB 1bf6, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.140 Metal-dependent hydrolases Gene3D
3.20.20.140.13
3.20.20.140.13.1
3.20.20.140.13.1.1
3.20.20.140.13.1.1.1
3.20.20.140.13.1.1.1.1

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Segment boundaries for domain 1bf6A00

Chopping figure for domain 1bf6A00
DomainStart PDB ResidueStop PDB Residue
1bf6A00 2 292

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.20.20.140.13.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1j6oA00 79.02 Thermotoga maritimaTatD DNase family protein [EC:3.1.21.-]Putative uncharacterized protein 3.20.20.140 259 14 85 3.65 4.28
1onwB02 78.97 Isoaspartyl dipeptidaseBeta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]Escherichia coli K-12 3.20.20.140 269 16 86 3.73 4.29
1zzmA00 78.53 Uncharacterized deoxyribonuclease yjjVTatD DNase family protein [EC:3.1.21.-]Escherichia coli K-12 3.20.20.140 259 12 85 3.88 4.52
2icsA02 76.27 Pyrimidine metabolismDihydroorotase [EC:3.5.2.3]Metabolic pathwaysEnterococcus faecalisPutative uncharacterized protein 3.20.20.140 260 13 81 3.92 4.81
3feqC02 75.43 3.20.20.140 299 9 80 3.76 4.66
2ffiA00 75.26 Pseudomonas putida KT24402-pyrone-4,6-dicarboxylic acid hydrolase, putative 3.20.20.140 268 10 83 3.98 4.77
3cjpA00 74.84 Predicted amidohodrolase (Dihydroorotase family)Clostridium acetobutylicum 3.20.20.140 260 12 75 3.56 4.71
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1bf6A00
SFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACT
GYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSF
STMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLS
MDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1bf6A00
SFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACT
GYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSF
STMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLS
MDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:57

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:57

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:24

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"