CATH Domain: 1bf5A02 XML data for domain: 1bf5A02

Molscript image for 1bf5A02
1bf5A02
PDB coordinates for domain 1bf5A02

PDB 1bf5, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.630 Gene3D
2.60.40.630.1
2.60.40.630.1.1
2.60.40.630.1.1.2
2.60.40.630.1.1.2.1
2.60.40.630.1.1.2.1.3

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Segment boundaries for domain 1bf5A02

Chopping figure for domain 1bf5A02
DomainStart PDB ResidueStop PDB Residue
1bf5A01 136 317
1bf5A02 318 460
1bf5A03 461 581
1bf5A04 582 710

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.60.40.630.1.1.2.1.3 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1eaqB00 75.53 Skeletal system developmentCentral nervous system developmentBehavioral response to painEmbryonic hemopoiesisProtein binding 2.60.40.720 122 8 66 2.90 4.34
1f00I01 74.75 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 2.60.40.920 95 10 61 2.95 4.81
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1bf5A02
VVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVLFDKDVNERNTVKGFRKFNILGTHTKVMNMEESTN
GSLAAEFRHLQLKEQKNAGTRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1bf5A02
VVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVLFDKDVNERNTVKGFRKFNILGTHTKVMNMEESTN
GSLAAEFRHLQLKEQKNAGTRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:11

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"