CATH Domain: 1bd8A00

There are 18 matching structural neighberhood comparisons for CATH ID 1.25.40.20.1.1.1.1.1 (SIMAX score < 5)

Match Depth	Match	SSAP score	Match Keywords	Match Superfamily	Length	Sequence Id	Overlap	RMSD	SIMAX
	2bkgA00	91.60		1.25.40.20	154	36	96	1.66	1.71
	1awcB00	90.50	Mus musculusGA-binding protein subunit beta-1	1.25.40.20	153	29	96	1.89	1.97
	1bi7B00	88.24	Bladder cancerSenescencePathways in cancerNon-small cell lung cancerProtein binding	1.25.40.20	125	48	78	1.07	1.36
	1n0rA00	87.14		1.25.40.20	126	38	78	1.91	2.44
	1yyhB00	86.39	Negative regulation of osteoblast differentiationPrion diseasesNegative regulation of BMP signaling pathwayNegative regulation of gene-specific transcriptionNucleus	1.25.40.20	189	23	80	2.14	2.64
	1ympA00	85.93	Negative regulation of gene-specific transcriptionNeural tube developmentNeurogenic locus notch homolog protein 1Regulation of somitogenesisRegulation of epithelial cell proliferation involved in prostate gland development	1.25.40.20	131	24	81	2.09	2.57
	1ycsB01	84.50	Induction of apoptosisNF-kappaB bindingNegative regulation of cell cycleHomo sapiensApoptosis-stimulating of p53 protein 2	1.25.40.20	128	25	79	2.46	3.09
	1s70B01	84.49	Focal adhesionGallus gallusProtein phosphatase 1 regulatory subunit 12ARegulation of actin cytoskeletonProtein phosphatase 1 regulatory subunit 12A	1.25.40.20	162	23	75	2.84	3.74
	2f8yB00	84.41	Negative regulation of osteoblast differentiationNegative regulation of BMP signaling pathwayPrion diseasesNegative regulation of gene-specific transcriptionNucleus	1.25.40.20	209	23	74	2.18	2.94
	3ehrA02	84.36	Osteoclast-stimulating factor 1OssificationIdentical protein bindingHomo sapiensSignal transduction	1.25.40.20	114	18	71	1.74	2.45
	3c5rA00	83.52	BRCA1-associated RING domain protein 1Protein homodimerization activityRNA bindingBRCA1-A complexNegative regulation of apoptosis	1.25.40.20	125	20	60	1.33	2.18
	1n0qB00	83.21		1.25.40.20	93	40	57	1.32	2.29
	1uohA00	83.07	26S proteasome non-ATPase regulatory subunit 10CytoplasmProteasome regulatory particleActin cytoskeletonHomo sapiens	1.25.40.20	223	27	67	1.98	2.92
	1k1aA00	82.32	Transcription factor bindingBcl3/NF-kappaB2 complexNegative regulation of apoptosisCytoplasmI-kappaB kinase/NF-kappaB cascade	1.25.40.20	228	25	67	2.22	3.27
	2dznA00	81.55	26S proteasome non-ATPase regulatory subunit 10Proteasome regulatory particle assemblyProbable 26S proteasome regulatory subunit p28NucleusSaccharomyces cerevisiae	1.25.40.20	226	25	68	2.53	3.71
	1iknD00	79.72	Cytoplasmic sequestering of NF-kappaBNeurotrophin signaling pathwayT cell receptor signaling pathwayApoptosisAdipocytokine signaling pathway	1.25.40.20	215	22	71	3.02	4.24
	1wdyA00	77.83	2-5A-dependent ribonucleaseRibonuclease L [EC:3.1.26.-]Homo sapiens	1.25.40.20	285	26	54	2.33	4.28
	1n11A00	71.78	Structural constituent of cytoskeletonMaintenance of epithelial cell apical/basal polarityEnzyme bindingHomo sapiensAnkyrin-1	1.25.40.20	404	32	38	1.91	4.98

>pdb|1bd8A00
RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF
LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGHM    

>pdb|1bd8A00
RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF
LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGHM