CATH Domain: 1b6gA00 XML data for domain: 1b6gA00

Molscript image for 1b6gA00
1b6gA00
PDB coordinates for domain 1b6gA00

PDB 1b6g, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1820 Gene3D
3.40.50.1820.4
3.40.50.1820.4.1
3.40.50.1820.4.1.1
3.40.50.1820.4.1.1.1
3.40.50.1820.4.1.1.1.1

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Segment boundaries for domain 1b6gA00

Chopping figure for domain 1b6gA00
DomainStart PDB ResidueStop PDB Residue
1b6gA00 1 310

Structural Neighbourhood (15 entries)

There are 15 matching structural neighberhood comparisons for CATH ID 3.40.50.1820.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 15 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1zoiA00 81.49 EsterasePseudomonas putida 3.40.50.1820 275 14 86 3.28 3.81
1brtA00 81.47 Streptomyces aureofaciensNon-haem bromoperoxidase BPO-A2 3.40.50.1820 277 15 84 3.03 3.59
1j1iA00 81.24 Meta cleavage compound hydrolaseJanthinobacterium sp. J3 3.40.50.1820 258 18 81 3.09 3.81
3i28A03 80.98 PeroxisomeSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase activityEpoxide hydrolase 2 3.40.50.1820 312 19 87 3.25 3.70
1iupA00 80.97 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolasePseudomonas fluorescens 3.40.50.1820 271 18 85 3.29 3.85
1ehyA00 80.22 3.40.50.1820 282 19 84 3.29 3.88
1c4xA00 79.98 Biphenyl degradation2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase2,6-dioxo-6-phenylhexa-3-enoate hydrolase [EC:3.7.1.8]Metabolic pathwaysFluorene degradation 3.40.50.1820 281 15 86 3.26 3.76
1q0rA00 79.69 RdmCStreptomyces purpurascens 3.40.50.1820 297 11 86 3.51 4.05
3bwxA00 78.99 Alpha/beta hydrolaseNovosphingobium aromaticivorans DSM 12444 3.40.50.1820 275 14 84 3.71 4.41
1mtzA00 78.96 Arginine and proline metabolismProline iminopeptidase [EC:3.4.11.5]Proline iminopeptidaseThermoplasma acidophilum 3.40.50.1820 290 14 86 4.25 4.94
2r11D00 78.14 Bacillus subtilisCarboxylesterase [EC:3.1.1.1]Uncharacterized carboxylesterase napMetabolic pathways 3.40.50.1820 274 15 85 3.70 4.33
3bdiA00 77.11 Putative uncharacterized protein Ta0194Thermoplasma acidophilum 3.40.50.1820 199 15 63 3.06 4.83
1m33A00 76.41 Cofactor bindingBiotin biosynthesis protein BioHCarboxylesterase bioHCarboxylesterase activityEscherichia coli K-12 3.40.50.1820 251 11 78 3.49 4.46
3e0xA00 76.16 Lipase-esterase related proteinClostridium acetobutylicum 3.40.50.1820 223 13 69 3.07 4.44
2i3dB00 74.12 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.40.50.1820 212 8 61 3.06 4.96
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Displaying entries 1 to 15 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1b6gA00
MVNAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAP
DFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNALMTDPVTQPAF
SAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAIDISTEAIS
FWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1b6gA00
MVNAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAP
DFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPA
FSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEA
ISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE
BLAST against CATH

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Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "1b6g000" to "1b6gA00" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:44

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"