CATH Domain: 1b63A02 XML data for domain: 1b63A02

Molscript image for 1b63A02
1b63A02
PDB coordinates for domain 1b63A02

PDB 1b63, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.230 Ribosomal Protein S5; domain 2
3.30.230.10 Gene3D
3.30.230.10.4
3.30.230.10.4.1
3.30.230.10.4.1.1
3.30.230.10.4.1.1.1
3.30.230.10.4.1.1.1.1

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Segment boundaries for domain 1b63A02

Chopping figure for domain 1b63A02
DomainStart PDB ResidueStop PDB Residue
1b63A01 1 216
1b63A02 217 330

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.30.230.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1s16A02 77.58 CytoplasmPlasmid partitioningTopoisomerase IV subunit B [EC:5.99.1.-]DNA topoisomerase 4 subunit BSister chromatid cohesion 3.30.230.10 168 12 62 2.85 4.56
1ei1A02 75.94 Escherichia coli O157:H7DNA gyrase subunit B [EC:5.99.1.3]DNA gyrase subunit B 3.30.230.10 173 12 60 2.79 4.64
3cwvA02 75.53 Myxococcus xanthus DK 1622DNA gyrase, B subunit, truncated 3.30.230.10 151 7 68 3.34 4.85
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1b63A02
GTAFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDP
HQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1b63A02
GTAFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDP
HQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:02

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:02

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:11

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"