CATH Domain: 1b4rA00 XML data for domain: 1b4rA00

Molscript image for 1b4rA00
1b4rA00
PDB coordinates for domain 1b4rA00

PDB 1b4r, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.670 Gene3D
2.60.40.670.2
2.60.40.670.2.1
2.60.40.670.2.1.1
2.60.40.670.2.1.1.1
2.60.40.670.2.1.1.1.1

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Segment boundaries for domain 1b4rA00

Chopping figure for domain 1b4rA00
DomainStart PDB ResidueStop PDB Residue
1b4rA00 8 87

Structural Neighbourhood (12 entries)

There are 12 matching structural neighberhood comparisons for CATH ID 2.60.40.670.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 12 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ulvA03 81.47 GlucodextranaseArthrobacter globiformis 2.60.40.1560 86 10 86 3.43 3.99
3cmgA04 80.19 Putative beta-galactosidaseBacteroides fragilis NCTC 9343 2.60.40.1560 87 5 85 3.48 4.09
1f00I01 79.92 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 2.60.40.920 95 7 83 3.24 3.90
1f00I02 79.32 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 2.60.40.1080 89 5 79 3.12 3.91
1cwvA02 78.97 InvasinYersinia pseudotuberculosis 2.60.40.920 97 12 79 3.45 4.35
1cwvA03 77.88 InvasinYersinia pseudotuberculosis 2.60.40.920 102 5 72 3.17 4.37
1o75A04 76.24 Treponema pallidum47 kDa membrane antigen 2.60.40.1270 82 6 84 3.90 4.63
1h8lA02 75.77 Zinc ion bindingLophonetta specularoidesCarboxypeptidase D 2.60.40.1120 79 16 80 3.72 4.65
1dceA02 75.08 Rattus norvegicusRab geranylgeranyltransferase activityProtein geranylgeranyltransferase type II [EC:2.5.1.60]Geranylgeranyl transferase type-2 subunit alpha 2.60.40.1130 103 6 67 3.29 4.84
1rl1A00 75.03 Suppressor of G2 allele of SKP1 homologKinetochoreSuppressor of G2 allele of SKP1NOD-like receptor signaling pathwayHomo sapiens 2.60.40.790 92 8 58 2.69 4.58
1p5uA02 73.35 Yersinia pestisChaperone protein caf1MProtein binding 2.60.40.1070 84 11 77 3.60 4.65
1ix2A00 72.72 Escherichia coliCopper resistance protein C 2.60.40.1220 97 11 77 3.68 4.76
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Displaying entries 1 to 12 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1b4rA00
ATLVGPHGPLASGQLAAFHIAAPLPVTATRWDFGDGSAEVDAAGPAASHRYVLPGRYHVTAVLALGAGSALLGTDVQVEA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1b4rA00
ATLVGPHGPLASGQLAAFHIAAPLPVTATRWDFGDGSAEVDAAGPAASHRYVLPGRYHVTAVLALGAGSALLGTDVQVEA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:02

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"