CATH Domain: 1b4pA01 XML data for domain: 1b4pA01

Molscript image for 1b4pA01
1b4pA01
PDB coordinates for domain 1b4pA01

PDB 1b4p, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.30 Glutaredoxin
3.40.30.10 Glutaredoxin Gene3D
3.40.30.10.25
3.40.30.10.25.1
3.40.30.10.25.1.1
3.40.30.10.25.1.1.1
3.40.30.10.25.1.1.1.1

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Segment boundaries for domain 1b4pA01

Chopping figure for domain 1b4pA01
DomainStart PDB ResidueStop PDB Residue
1b4pA01 1 85
1b4pA01 191 217
1b4pA02 86 190

Structural Neighbourhood (17 entries)

There are 17 matching structural neighberhood comparisons for CATH ID 3.40.30.10.25.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 17 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1tu7A01 88.12 Onchocerca volvulusGlutathione S-transferase 2 3.40.30.10 99 34 87 2.44 2.79
2a2rA01 87.57 Anti-apoptosisPathways in cancerCentral nervous system developmentGlutathione S-transferase PGlutathione metabolism 3.40.30.10 101 27 86 2.10 2.42
2gsqA01 85.64 Ommastrephes sloaniGlutathione S-transferase 3.40.30.10 94 23 80 1.92 2.39
2cvdA01 85.24 Prostaglandin-D synthase activityArachidonic acid metabolismProstaglandin-H2 D-isomerase [EC:5.3.99.2]Metabolic pathwaysCytoplasm 3.40.30.10 90 28 79 2.63 3.31
1oktA01 84.74 Glutathione S-transferase [EC:2.5.1.18]Metabolism of xenobiotics by cytochrome P450Glutathione S-transferaseGlutathione metabolismPlasmodium falciparum 3.40.30.10 85 29 73 2.21 3.02
2pvqA01 82.33 Glutathione S-transferaseOchrobactrum anthropi 3.40.30.10 95 16 80 3.27 4.07
2c3nA01 82.07 Soluble fractionGlutathione S-transferase theta-1Glutathione metabolic processGlutathione transferase activityGlutathione metabolism 3.40.30.10 79 21 69 2.24 3.22
2wb9A01 81.97 Fasciola hepaticaGlutathione transferase sigma class 3.40.30.10 82 31 66 1.71 2.59
1k0mA01 81.61 Membrane fractionChloride intracellular channel protein 1Soluble fractionChloride transportSignal transduction 3.40.30.10 92 14 68 2.86 4.16
3f6fA01 81.50 Glutathione S-transferase [EC:2.5.1.18]Drug metabolism - cytochrome P450Metabolism of xenobiotics by cytochrome P450Glutathione S transferase D10Glutathione transferase activity 3.40.30.10 78 16 68 2.30 3.35
3ergA01 81.42 Glutathione S-transferase 2Glutathione metabolic processSaccharomyces cerevisiaeGlutathione transferase activityMitochondrion 3.40.30.10 90 16 76 3.59 4.68
2cz2A01 80.24 Tyrosine metabolismGlutathione transferase activityGlutathione metabolismMetabolic pathwaysGlutathione S-transferase [EC:2.5.1.18] 3.40.30.10 76 23 66 2.29 3.42
3cbuA01 79.86 Glutathione S-transferase [EC:2.5.1.18]Ralstonia eutropha JMP134Metabolism of xenobiotics by cytochrome P450Probable gst-related proteinGlutathione metabolism 3.40.30.10 75 18 64 3.09 4.81
1abaA00 78.52 Enterobacteria phage T4Glutaredoxin 3.40.30.10 87 8 69 2.65 3.81
3lgcA00 78.11 Francisella tularensis subsp. tularensisGlutaredoxin 1Glutaredoxin 1 3.40.30.10 86 10 70 3.13 4.44
1egoA00 77.37 Glutaredoxin 1Glutaredoxin-1Protein bindingEscherichia coli K-12 3.40.30.10 85 5 69 3.27 4.70
1nm3A02 76.78 Peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]Haemophilus influenzaeHybrid peroxiredoxin hyPrx5 3.40.30.10 70 14 61 2.61 4.24
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Displaying entries 1 to 17 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1b4pA01
PMILGYWNVRGLTHPIRLLLEYTDSSYEEKRYAMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGSRKITQSNAIMRYLA
RKHHLKKISDYMKSGRFLSKPIFAKMAFWNPK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1b4pA01
PMILGYWNVRGLTHPIRLLLEYTDSSYEEKRYAMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGSRKITQSNAIMRYLA
RKHHLKKISDYMKSGRFLSKPIFAKMAFWNPK
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:10

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:10

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:10

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"