CATH Domain: 1b43A02 XML data for domain: 1b43A02

Molscript image for 1b43A02
1b43A02
PDB coordinates for domain 1b43A02

PDB 1b43, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.150 DNA polymerase; domain 1
1.10.150.20 5' to 3' exonuclease, C-terminal subdomain Gene3D
1.10.150.20.15
1.10.150.20.15.1
1.10.150.20.15.1.1
1.10.150.20.15.1.1.1
1.10.150.20.15.1.1.1.1

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Segment boundaries for domain 1b43A02

Chopping figure for domain 1b43A02
DomainStart PDB ResidueStop PDB Residue
1b43A01 1 219
1b43A02 220 280

Structural Neighbourhood (14 entries)

There are 14 matching structural neighberhood comparisons for CATH ID 1.10.150.20.15.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 14 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2fi1A02 81.22 Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 1.10.150.240 64 8 81 3.62 4.46
2ztdA02 80.21 Homologous recombinationHolliday junction ATP-dependent DNA helicase ruvAHolliday junction DNA helicase RuvAMycobacterium tuberculosis 1.10.150.20 68 9 66 2.44 3.69
1ctfA00 79.85 Ribosome50S ribosomal protein L7/L12Large subunit ribosomal protein L7/L12Cytosolic large ribosomal subunitStructural constituent of ribosome 3.30.1390.10 68 16 73 2.90 3.94
2fdrA02 79.31 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 1.10.150.240 64 11 78 3.01 3.85
2ah5A02 78.97 Glyoxylate and dicarboxylate metabolismMetabolic pathwaysPhosphoglycolate phosphatase [EC:3.1.3.18]Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 1.10.150.240 64 4 81 3.08 3.79
1tj7A03 78.82 Arginine and proline metabolismAlanine, aspartate and glutamate metabolismMetabolic pathwaysArgininosuccinate lyase [EC:4.3.2.1]Argininosuccinate lyase 1.10.40.30 71 18 73 3.50 4.78
3ddhA02 76.97 Bacteroides thetaiotaomicronPutative haloacid dehalogenase-like family hydrolasePutative hydrolase of the HAD superfamily 1.10.150.240 78 4 66 3.03 4.54
1te2A02 76.61 Fructose and mannose metabolismMetabolic pathwaysRiboflavin metabolismThiamine metabolismMetal ion binding 1.10.150.240 70 3 77 3.52 4.56
2hdoA02 75.92 Phosphoglycolate phosphatase [EC:3.1.3.18]Lactobacillus plantarumMetabolic pathwaysGlyoxylate and dicarboxylate metabolismPhosphoglycolate phosphatase (Putative) 1.10.150.240 59 3 80 3.77 4.69
2pkeA02 75.09 Xanthomonas campestris pv. campestrisPutative hydrolase of the HAD superfamilyHydrolase, haloacid delahogenase-like family 1.10.150.240 75 6 64 3.00 4.69
1swvA02 75.04 Bacillus cereusPhosphonoacetaldehyde hydrolase 1.10.150.240 78 13 62 2.78 4.43
2wf7A02 74.68 Starch and sucrose metabolismLactococcus lactis subsp. lactisBeta-phosphoglucomutaseBeta-phosphoglucomutase [EC:5.4.2.6] 1.10.150.240 78 14 65 2.81 4.30
3e58A02 74.11 Streptococcus thermophilus LMG 18311Beta-phosphoglucomutase, putative 1.10.150.240 62 6 83 4.01 4.78
2nyvA02 71.71 Phosphoglycolate phosphatase [EC:3.1.3.18]Metabolic pathwaysGlyoxylate and dicarboxylate metabolismAquifex aeolicusPhosphoglycolate phosphatase 1.10.150.240 64 3 82 3.95 4.77
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Displaying entries 1 to 14 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1b43A02
LTREKLIELAILVGTDYNPGGIKGIGLKKALEIVRHSKDPLAKFQKQSDVDLYAIKEFFLN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1b43A02
LTREKLIELAILVGTDYNPGGIKGIGLKKALEIVRHSKDPLAKFQKQSDVDLYAIKEFFLN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:10

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"