CATH Domain: 1b22A00 XML data for domain: 1b22A00

Molscript image for 1b22A00
1b22A00
PDB coordinates for domain 1b22A00

PDB 1b22, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.150 DNA polymerase; domain 1
1.10.150.20 5' to 3' exonuclease, C-terminal subdomain Gene3D
1.10.150.20.27
1.10.150.20.27.1
1.10.150.20.27.1.1
1.10.150.20.27.1.1.1
1.10.150.20.27.1.1.1.1

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Segment boundaries for domain 1b22A00

Chopping figure for domain 1b22A00
DomainStart PDB ResidueStop PDB Residue
1b22A00 16 85

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.10.150.20.27.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1hq1A00 75.39 Protein exportBacterial secretion systemEscherichia coli O157:H7Signal recognition particle proteinSignal recognition particle subunit SRP54 1.10.260.30 76 5 82 3.85 4.64
1wcnA01 70.61 N utilization substance protein ATranscription elongation protein nusAEscherichia coli K-12 1.10.150.20 60 18 81 3.82 4.69
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1b22A00
EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAKLVPMG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1b22A00
MAMQMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAK
LVPMG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:25

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"