CATH Domain: 1b12B01 XML data for domain: 1b12B01

Molscript image for 1b12B01
1b12B01
PDB coordinates for domain 1b12B01

PDB 1b12, Chain B, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.10 Ribbon
2.10.109 Umud Fragment, subunit A
2.10.109.10 Umud Fragment, subunit A Gene3D
2.10.109.10.2
2.10.109.10.2.1
2.10.109.10.2.1.1
2.10.109.10.2.1.1.1
2.10.109.10.2.1.1.1.2

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Segment boundaries for domain 1b12B01

Chopping figure for domain 1b12B01
DomainStart PDB ResidueStop PDB Residue
1b12B01 79 153
1b12B01 263 319
1b12B02 154 188
1b12B02 224 262

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.10.109.10.2.1.1.1.2 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1f39A00 82.49 Repressor protein CIEnterobacteria phage lambda 2.10.109.10 101 14 80 2.92 3.65
1umuB00 81.08 Protein umuDDNA polymerase V [EC:3.4.21.-]Escherichia coli K-12 2.10.109.10 104 12 73 3.23 4.37
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1b12B01
FIYEPFQIPSGSMMPTLLIGDFILVEKFGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDVPPGQYFMMGDNRDNSADSRY
WGFVPEANLVGRATAIWMSFDLRLSRI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1b12B01
VRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDVP
PGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGLRLSRI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:10

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"