CATH Domain: 1ap8A00 XML data for domain: 1ap8A00

Molscript image for 1ap8A00
1ap8A00
PDB coordinates for domain 1ap8A00

PDB 1ap8, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.760 RNA Cap, Translation Initiation Factor Eif4e
3.30.760.10 RNA Cap, Translation Initiation Factor Eif4e Gene3D
3.30.760.10.3
3.30.760.10.3.1
3.30.760.10.3.1.1
3.30.760.10.3.1.1.1
3.30.760.10.3.1.1.1.1

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Segment boundaries for domain 1ap8A00

Chopping figure for domain 1ap8A00
DomainStart PDB ResidueStop PDB Residue
1ap8A00 1 213

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1ap8A00
MSVEEVSKKFEENVSVDDTTATPKTVLSDSAHFDVKHPLNTKWTLWYTKPAVDKSESWSDLLRPVTSFQTVEEFWAIIQN
IPEPHELPLKSDYHVFRNDVRPEWEDEANAKGGKWSFQLRGKGADIDELWLRTLLAVIGETIDEDDSQINGVVLSIRKGG
NKFALWTKSEDKEPLLRIGGKFKQVLKLTDDGHLEFFPHSSANGRHPQPSITL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ap8A00
MSVEEVSKKFEENVSVDDTTATPKTVLSDSAHFDVKHPLNTKWTLWYTKPAVDKSESWSDLLRPVTSFQTVEEFWAIIQN
IPEPHELPLKSDYHVFRNDVRPEWEDEANAKGGKWSFQLRGKGADIDELWLRTLLAVIGETIDEDDSQINGVVLSIRKGG
NKFALWTKSEDKEPLLRIGGKFKQVLKLTDDGHLEFFPHSSANGRHPQPSITL
BLAST against CATH

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Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "1ap8000" to "1ap8A00" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 19:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:31

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"