CATH Domain: 1aohB00 XML data for domain: 1aohB00

Molscript image for 1aohB00
1aohB00
PDB coordinates for domain 1aohB00

PDB 1aoh, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.680 Gene3D
2.60.40.680.3
2.60.40.680.3.1
2.60.40.680.3.1.1
2.60.40.680.3.1.1.1
2.60.40.680.3.1.1.1.1

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Segment boundaries for domain 1aohB00

Chopping figure for domain 1aohB00
DomainStart PDB ResidueStop PDB Residue
1aohB00 1 147

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.60.40.680.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1g1kA00 90.69 Scaffolding proteinClostridium cellulolyticum 2.60.40.680 143 28 94 1.54 1.63
1jv2A04 73.89 Negative regulation of macrophage derived foam cell differentiationProtein bindingNegative regulation of low-density lipoprotein receptor biosynthetic processIntegrin alpha-VNegative regulation of lipid storage 2.60.40.1530 188 8 67 3.04 4.54
2pr9A02 73.88 Huntington's diseaseEndocytosisRattus norvegicusClathrin vesicle coatAP-2 complex subunit mu-1 2.60.40.1170 112 5 74 3.32 4.44
1ayoA00 73.11 Bos taurusAlpha-2-macroglobulinAlpha-2-macroglobulinComplement and coagulation cascades 2.60.40.690 130 10 82 4.05 4.88
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1aohB00
TDLDAVRIKVDTVNAKPGDTVRIPVRFSGIPSKGIANCDFVYSYDPNVLEIIEIEPGELIVDPNPTKSFDTAVYPDRKMI
VFLFAEDSGTGAYAITEDGVFATIVAKVKSGAPNGLSVIKFVEVGGFANNDLVEQKTQFFDGGVNVG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1aohB00
TDLDAVRIKVDTVNAKPGDTVRIPVRFSGIPSKGIANCDFVYSYDPNVLEIIEIEPGELIVDPNPTKSFDTAVYPDRKMI
VFLFAEDSGTGAYAITEDGVFATIVAKVKSGAPNGLSVIKFVEVGGFANNDLVEQKTQFFDGGVNVG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:02

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"