CATH Domain: 1amuB01 XML data for domain: 1amuB01

Molscript image for 1amuB01
1amuB01
PDB coordinates for domain 1amuB01

PDB 1amu, Chain B, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.980 Gene3D
3.40.50.980.1
3.40.50.980.1.1
3.40.50.980.1.1.1
3.40.50.980.1.1.1.1
3.40.50.980.1.1.1.1.1

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Segment boundaries for domain 1amuB01

Chopping figure for domain 1amuB01
DomainStart PDB ResidueStop PDB Residue
1amuB01 36 205
1amuB02 206 345
1amuB03 346 426
1amuB04 435 528

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.980.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1t5hX01 87.12 4-chlorobenzoyl CoA ligaseAlcaligenes sp. AL3007 3.40.50.980 166 14 92 2.68 2.89
1mdbA01 86.51 2,3-dihydroxybenzoate-AMP ligase [EC:2.7.7.58]Bacillus subtilis2,3-dihydroxybenzoate-AMP ligaseBiosynthesis of siderophore group nonribosomal peptides 3.40.50.980 158 16 85 2.10 2.46
1lciA01 84.65 Photinus pyralisLuciferin 4-monooxygenasePeroxisome 3.40.50.980 153 15 79 2.21 2.79
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1amuB01
PRDKTIHQLFEEQVSKRPNNVAIVCENEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGA
YVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNQFNGQVEIFEEDTIKIREGTNLHVPSKSTDLAYVIYTNPKGTM
LEHK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1amuB01
PRDKTIHQLFEEQVSKRPNNVAIVCENEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGA
YVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVEIFEEDTIKIREGTNLHVPSKSTDLAYVIYTSGTTG
NPKGTMLEHK
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:08

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"