CATH Domain: 1amuA02 XML data for domain: 1amuA02

Molscript image for 1amuA02
1amuA02
PDB coordinates for domain 1amuA02

PDB 1amu, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.980 Gene3D
3.40.50.980.5
3.40.50.980.5.1
3.40.50.980.5.1.1
3.40.50.980.5.1.1.1
3.40.50.980.5.1.1.1.1

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Segment boundaries for domain 1amuA02

Chopping figure for domain 1amuA02
DomainStart PDB ResidueStop PDB Residue
1amuA01 36 205
1amuA02 206 345
1amuA03 346 426
1amuA04 435 530

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.50.980.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1t5hX02 86.31 4-chlorobenzoyl CoA ligaseAlcaligenes sp. AL3007 3.40.50.980 142 12 89 2.44 2.73
1lciA02 83.08 Photinus pyralisLuciferin 4-monooxygenasePeroxisome 3.40.50.980 142 11 91 2.48 2.71
1mdbA02 81.50 2,3-dihydroxybenzoate-AMP ligase [EC:2.7.7.58]Bacillus subtilis2,3-dihydroxybenzoate-AMP ligaseBiosynthesis of siderophore group nonribosomal peptides 3.40.50.980 174 12 77 2.79 3.60
1usgA02 76.74 ABC transportersLeucine-specific-binding proteinBranched-chain amino acid transport system substrate-binding proteinEscherichia coli K-12 3.40.50.2300 144 7 89 4.45 4.97
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1amuA02
GISNLKVFFENSLNVTEKDRIGQFASISFDASVWEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVV
HLDPERILSIQTLITAGSATSPSLVNKWKEKVTYINAYGPTETTICATTWVATKETIGHS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1amuA02
GISNLKVFFENSLNVTEKDRIGQFASISFDASVWEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVV
HLDPERILSIQTLITAGSATSPSLVNKWKEKVTYINAYGPTETTICATTWVATKETIGHS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:08

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"