CATH Domain: 1ajsB02 XML data for domain: 1ajsB02

Molscript image for 1ajsB02
1ajsB02
PDB coordinates for domain 1ajsB02

PDB 1ajs, Chain B, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.640 Aspartate Aminotransferase; domain 2
3.40.640.10 Type I PLP-dependent aspartate aminotransferase-like (Major domain) Gene3D
3.40.640.10.21
3.40.640.10.21.1
3.40.640.10.21.1.1
3.40.640.10.21.1.1.1
3.40.640.10.21.1.1.1.1

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Segment boundaries for domain 1ajsB02

Chopping figure for domain 1ajsB02
DomainStart PDB ResidueStop PDB Residue
1ajsB01 15 48
1ajsB01 328 408
1ajsB02 49 327

Structural Neighbourhood (17 entries)

There are 17 matching structural neighberhood comparisons for CATH ID 3.40.640.10.21.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 17 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3dydA02 81.74 Tyrosine metabolismL-tyrosine:2-oxoglutarate aminotransferase activityPhenylalanine metabolismMetabolic pathwaysUbiquinone and other terpenoid-quinone biosynthesis 3.40.640.10 244 13 86 3.02 3.48
1xi9A02 80.82 Pyrococcus furiosusAminotransferase [EC:2.6.1.-]Alanine aminotransferase 3.40.640.10 242 13 86 3.09 3.58
1o4sA02 80.63 Tyrosine metabolismThermotoga maritimaArginine and proline metabolismAspartate aminotransferase [EC:2.6.1.1]Metabolic pathways 3.40.640.10 221 18 78 2.72 3.47
1gd9A02 79.57 Tyrosine metabolismArginine and proline metabolismAspartate aminotransferase [EC:2.6.1.1]Pyrococcus horikoshiiMetabolic pathways 3.40.640.10 223 17 78 3.17 4.06
1d2fA02 79.24 Nitrogen metabolismSelenoamino acid metabolismSulfur metabolismMetabolic pathwaysCysteine and methionine metabolism 3.40.640.10 243 10 84 3.51 4.13
1c7nA02 78.31 Treponema denticolaHemolysin 3.40.640.10 225 10 79 3.41 4.31
1fg7A01 76.87 Tyrosine metabolismHistidine metabolismMetabolic pathwaysPhenylalanine metabolismNovobiocin biosynthesis 3.40.640.10 203 17 72 3.03 4.19
1fc4A01 76.21 Glycine, serine and threonine metabolismMetal ion bindingLigase activity2-amino-3-ketobutyrate coenzyme A ligaseGlycine C-acetyltransferase [EC:2.3.1.29] 3.40.640.10 230 7 76 3.34 4.34
1svvA01 76.16 Leishmania major strain FriedlinThreonine aldolase [EC:4.1.2.5]Glycine, serine and threonine metabolismMetabolic pathwaysPutative uncharacterized protein 3.40.640.10 242 11 79 3.78 4.78
1sffA02 76.16 Valine, leucine and isoleucine degradationPropanoate metabolismMetabolic pathwaysButanoate metabolismBeta-Alanine metabolism 3.40.640.10 260 8 84 3.95 4.67
1uu1A02 76.14 Thermotoga maritimaTyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.40.640.10 203 15 72 3.10 4.29
1zodA02 76.13 2,2-dialkylglycine decarboxylaseBurkholderia cepacia 3.40.640.10 264 9 85 4.25 4.99
3ftbA02 76.08 Tyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismPhenylalanine metabolismMetabolic pathways 3.40.640.10 222 8 77 3.07 3.95
1o69A01 76.06 Campylobacter jejuniAminotransferase homolog 3.40.640.10 233 9 75 3.75 4.94
3ffhB02 75.90 Tyrosine metabolismListeria innocuaHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.40.640.10 208 14 73 3.61 4.90
2oatA02 75.56 Ornithine--oxo-acid transaminase [EC:2.6.1.13]Arginine and proline metabolismOrnithine-oxo-acid transaminase activityVisual perceptionHomo sapiens 3.40.640.10 250 10 82 4.03 4.91
3k40A02 75.49 Dopamine biosynthetic process from tyrosineDevelopmental pigmentationGrowthProtein bindingDrosophila melanogaster 3.40.640.10 267 7 84 4.22 4.99
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Displaying entries 1 to 17 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ajsB02
VLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNN
KDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQI
ASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSNFGLYNERVGNLTVVAKEPDSILRVLSQMQK
IVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ajsB02
VLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNN
KDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQI
ASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSXNFGLYNERVGNLTVVAKEPDSILRVLSQMQ
KIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:27

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:27

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:08

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"