CATH Domain: 1afwA01 XML data for domain: 1afwA01

Molscript image for 1afwA01
1afwA01
PDB coordinates for domain 1afwA01

PDB 1afw, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.47 Peroxisomal Thiolase; Chain A, domain 1
3.40.47.10 Gene3D
3.40.47.10.10
3.40.47.10.10.1
3.40.47.10.10.1.1
3.40.47.10.10.1.1.1
3.40.47.10.10.1.1.1.1

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Segment boundaries for domain 1afwA01

Chopping figure for domain 1afwA01
DomainStart PDB ResidueStop PDB Residue
1afwA01 28 160
1afwA01 223 302
1afwA02 174 222
1afwA02 303 414

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.47.10.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1wdkC01 89.48 Pseudomonas fragi3-ketoacyl-CoA thiolase 3.40.47.10 213 30 96 1.90 1.97
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1afwA01
LLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAAC
LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKLFEDEILPIKLPDGSICQSDEGPRPNV
TAESLSSIRPAFIGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1afwA01
LLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAAC
LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKLFEDEILPIKLPDGSICQSDEGPRPNV
TAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRY
BLAST against CATH

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Domain History Events (2)

Domain assigned by lewis on 18 Jan 2007 18:51

Reassigning this domain to its previous classification as part of fragment fixing process in preparation for release v3.1.0.

Insertion by lewis on 18 Jan 2007 18:51

Rechopping chains just before release v3.1.0 in order to fix missing fragments.