CATH Domain: 1a9xA08 XML data for domain: 1a9xA08

Molscript image for 1a9xA08
1a9xA08
PDB coordinates for domain 1a9xA08

PDB 1a9x, Chain A, Domain 8

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1380 Gene3D
3.40.50.1380.6
3.40.50.1380.6.1
3.40.50.1380.6.1.1
3.40.50.1380.6.1.1.1
3.40.50.1380.6.1.1.1.1

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Segment boundaries for domain 1a9xA08

Chopping figure for domain 1a9xA08
DomainStart PDB ResidueStop PDB Residue
1a9xA01 1 116
1a9xA02 117 140
1a9xA02 211 403
1a9xA03 141 210
1a9xA04 404 553
1a9xA05 554 663
1a9xA06 664 686
1a9xA06 757 936
1a9xA07 687 756
1a9xA08 937 1042

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.40.50.1380.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1mioB04 79.59 Nitrogenase molybdenum-iron protein beta chainClostridium pasteurianum 3.40.50.1980 98 13 78 3.35 4.28
3eq2B01 78.52 Pseudomonas aeruginosaProbable two-component response regulator 3.40.50.2300 103 8 69 3.17 4.54
1m1nB03 77.74 Nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]Nitrogen metabolismAzotobacter vinelandiiNitrogenase molybdenum-iron protein beta chainMetabolic pathways 3.40.50.1980 106 12 78 3.31 4.23
1dljA02 76.64 Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismPentose and glucuronate interconversionsAscorbate and aldarate metabolismMetabolic pathways 3.40.50.1870 108 7 77 3.71 4.77
1kjnA00 76.55 Methanothermobacter thermautotrophicus str. Delta HConserved protein 3.40.50.10160 148 13 61 2.57 4.18
1efdN01 75.38 ABC transportersIron(3+)-hydroxamate-binding protein fhuDIron complex transport system substrate-binding proteinEscherichia coli K-12 3.40.50.1980 91 7 80 3.80 4.74
2qr3A00 74.67 Bacteroides fragilisTwo-component system response regulator 3.40.50.2300 119 3 63 3.02 4.73
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1a9xA08
STMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINT
TSGRRAIEDSRVIRRSALQYKVHYDT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1a9xA08
STMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINT
TSGRRAIEDSRVIRRSALQYKVHYDT
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:20

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:20

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:06

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"