CATH Domain: 1a91A00 XML data for domain: 1a91A00

Molscript image for 1a91A00
1a91A00
PDB coordinates for domain 1a91A00

PDB 1a91, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.20 F1FO ATP Synthase
1.20.20.10 F1FO ATP Synthase Gene3D
1.20.20.10.3
1.20.20.10.3.1
1.20.20.10.3.1.1
1.20.20.10.3.1.1.1
1.20.20.10.3.1.1.1.1

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Segment boundaries for domain 1a91A00

Chopping figure for domain 1a91A00
DomainStart PDB ResidueStop PDB Residue
1a91A00 1 79

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 1.20.20.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1m56C01 81.96 Oxidative phosphorylationMetabolic pathwaysRhodobacter sphaeroidesCytochrome c oxidase subunit III [EC:1.9.3.1]Cytochrome c oxidase polypeptide III (Cytochrome AA3 subunit 3) 1.10.287.70 69 10 83 3.69 4.42
1bsmA01 80.53 Superoxide dismutase [Mn/Fe]Propionibacterium freudenreichii subsp. shermanii 1.10.287.990 64 14 79 3.27 4.10
1nt2B02 80.02 Archaeoglobus fulgidusProtein bindingPutative uncharacterized protein 1.10.287.660 67 2 62 1.79 2.89
1v54C01 79.75 Cytochrome c oxidase subunit 3Bos taurus 1.10.287.70 68 5 82 3.42 4.16
1dd5A01 79.50 Thermotoga maritimaRibosome recycling factorRibosome-recycling factor 1.10.132.20 109 7 71 2.75 3.84
3bz1Z00 78.60 PhotosynthesisThermosynechococcus elongatus BP-1Photosystem II reaction center protein ZPhotosystem II PsbZ proteinMetabolic pathways 1.10.287.740 62 14 77 3.84 4.97
1sumB01 76.30 Thermotoga maritimaPhosphate transport system proteinPhosphate transport system protein phoU homolog 2 1.20.58.220 107 5 57 2.66 4.67
2i0mA02 73.55 Phosphate transport system proteinPhosphate transport system protein phoUStreptococcus pneumoniae 1.20.58.220 101 5 55 2.36 4.26
1k04A02 71.60 Focal adhesion kinase 1Integrin-mediated signaling pathwayCytoskeletonFocal adhesionHomo sapiens 1.20.120.330 104 5 43 2.05 4.74
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1a91A00
MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1a91A00
MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA
BLAST against CATH

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Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "1a91000" to "1a91A00" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 18:17

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:17

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:39

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"