CATH Domain: 1a7cA02 XML data for domain: 1a7cA02

Molscript image for 1a7cA02
1a7cA02
PDB coordinates for domain 1a7cA02

PDB 1a7c, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.39 Alpha-1-antitrypsin; domain 1
2.30.39.10 Alpha-1-antitrypsin, domain 1 Gene3D
2.30.39.10.7
2.30.39.10.7.1
2.30.39.10.7.1.1
2.30.39.10.7.1.1.1
2.30.39.10.7.1.1.1.1

[top]
Segment boundaries for domain 1a7cA02

Chopping figure for domain 1a7cA02
DomainStart PDB ResidueStop PDB Residue
1a7cA01 33 170
1a7cA01 281 325
1a7cA01 350 359
1a7cA02 171 280
1a7cA02 326 349

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 2.30.39.10.7.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1sekA02 89.42 Manduca sextaSerine protease inhibitor 2.30.39.10 117 31 96 3.05 3.16
3f02B02 88.01 Peripheral nervous system developmentNeuroserpinHomo sapiensCentral nervous system developmentSerine-type endopeptidase inhibitor activity 2.30.39.10 99 35 82 1.73 2.10
2h4pA02 86.19 Gallus gallusHeterochromatin-associated protein MENT 2.30.39.10 102 27 80 1.63 2.02
1hp7A01 85.85 Alpha-1-antitrypsinProtease bindingAlpha-1-antitrypsinHomo sapiensExtracellular space 2.30.39.10 95 29 79 1.79 2.26
1mtpA02 84.73 Proteinase inhibitor I4, serpinThermobifida fusca YX 2.30.39.10 91 21 75 2.06 2.72
1jmoA02 84.20 Heparin cofactor IIHomo sapiensHeparin cofactor 2Complement and coagulation cascades 2.30.39.10 150 28 70 2.22 3.14
2rivA02 83.22 Thyroxine-binding globulinHomo sapiensExtracellular spaceSerine-type endopeptidase inhibitor activity 2.30.39.10 87 21 72 1.68 2.32
1k9oI02 82.94 Manduca sextaAlaserpinProtein binding 2.30.39.10 161 30 72 2.24 3.11
1imvA01 82.48 Negative regulation of angiogenesisHomo sapiensPigment epithelium-derived factorCell proliferationPositive regulation of neurogenesis 2.30.39.10 169 26 68 2.18 3.18
[1]
Displaying entries 1 to 9 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1a7cA02
FNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSAL
TNILSAQLISHWKGNMTRLPRLLVLPKFSLIEVNESGTAP
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1a7cA02
FNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSAL
TNILSAQLISHWKGNMTRLPRLLVLPKFSLIEVNESGTVESSSTAVIVSARMAP
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:06

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"