CATH Domain: 1a31A03 XML data for domain: 1a31A03

Molscript image for 1a31A03
1a31A03
PDB coordinates for domain 1a31A03

PDB 1a31, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.15 Topoisomerase I; Chain A, domain 3
3.90.15.10 Topoisomerase I; Chain A, domain 3 Gene3D
3.90.15.10.1
3.90.15.10.1.1
3.90.15.10.1.1.1
3.90.15.10.1.1.1.1
3.90.15.10.1.1.1.1.1

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Segment boundaries for domain 1a31A03

Chopping figure for domain 1a31A03
DomainStart PDB ResidueStop PDB Residue
1a31A01 236 319
1a31A02 320 430
1a31A03 431 580
1a31A04 591 626
1a31A04 720 763

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.90.15.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1a41A01 81.01 Vaccinia virus WRDNA topoisomerase 1 3.90.15.10 127 19 83 3.35 4.02
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1a31A03
PSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVE
HINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1a31A03
PSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVE
HINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:05

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"