CATH Domain: 1a17A00 XML data for domain: 1a17A00

Molscript image for 1a17A00
1a17A00
PDB coordinates for domain 1a17A00

PDB 1a17, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.25 Alpha Horseshoe
1.25.40 Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
1.25.40.10 Gene3D
1.25.40.10.6
1.25.40.10.6.1
1.25.40.10.6.1.1
1.25.40.10.6.1.1.1
1.25.40.10.6.1.1.1.1

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Segment boundaries for domain 1a17A00

Chopping figure for domain 1a17A00
DomainStart PDB ResidueStop PDB Residue
1a17A00 19 177

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 1.25.40.10.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1p5qA02 86.62 NucleusHeat shock protein bindingProtein foldingCytoplasmFK506-binding protein 4/5 [EC:5.2.1.8] 1.25.40.10 166 16 89 3.44 3.83
1elrA00 85.84 Prion diseasesNucleusProtein bindingStress-induced-phosphoprotein 1Response to stress 1.25.40.10 128 28 76 2.09 2.75
2hr2A00 83.52 Chlorobaculum tepidumPutative uncharacterized protein 1.25.40.10 148 14 76 3.45 4.50
1na3A00 83.19 1.25.40.10 86 30 54 0.96 1.77
2v5fA00 79.78 Prolyl 4-hydroxylase subunit alpha-1Homo sapiensProcollagen-proline 4-dioxygenase activityMitochondrion 1.25.40.10 97 9 56 1.81 3.20
2r5sA01 77.59 Vibrio parahaemolyticusPutative uncharacterized protein VP0806Putative thioredoxin 1.25.40.10 82 12 50 2.12 4.16
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1a17A00
PPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKG
YYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1a17A00
RDEPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY
IKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDE
YSGPKL
BLAST against CATH

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Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "1a17000" to "1a17A00" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 18:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:44

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"