CATH Domain: 1a02N02 XML data for domain: 1a02N02

Molscript image for 1a02N02
1a02N02
PDB coordinates for domain 1a02N02

PDB 1a02, Chain N, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.10 Immunoglobulins Gene3D
2.60.40.10.182
2.60.40.10.182.1
2.60.40.10.182.1.1
2.60.40.10.182.1.1.1
2.60.40.10.182.1.1.1.5

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Segment boundaries for domain 1a02N02

Chopping figure for domain 1a02N02
DomainStart PDB ResidueStop PDB Residue
1a02N01 399 569
1a02N02 570 678

Structural Neighbourhood (26 entries)

There are 26 matching structural neighberhood comparisons for CATH ID 2.60.40.10.182.1.1.1.5 (SIMAX score < 5)

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Displaying entries 1 to 26 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1imhC02 90.64 Nuclear factor of activated T-cells 5Transcription from RNA polymerase II promoterSequence-specific DNA binding transcription factor activityNucleusExcretion 2.60.40.10 106 32 97 2.52 2.59
2uzyB03 83.78 Hepatocyte growth factor receptor activityBasal plasma membranePathways in cancerEpithelial cell signaling in Helicobacter pylori infectionProto-oncogene tyrosine-protein kinase Met [EC:2.7.10.1] 2.60.40.10 87 19 72 1.39 1.91
2uzxB02 82.39 Hepatocyte growth factor receptor activityBasal plasma membraneEpithelial cell signaling in Helicobacter pylori infectionPathways in cancerProto-oncogene tyrosine-protein kinase Met [EC:2.7.10.1] 2.60.40.10 121 15 71 3.10 4.31
2uzyB04 81.72 Basal plasma membraneHepatocyte growth factor receptor activityEpithelial cell signaling in Helicobacter pylori infectionPathways in cancerProto-oncogene tyrosine-protein kinase Met [EC:2.7.10.1] 2.60.40.10 79 13 71 1.63 2.29
1jmxA03 79.06 Quinohemoprotein amine dehydrogenase 60 kDa subunitPseudomonas putida 2.60.40.10 79 10 73 2.76 3.74
1cd9D01 78.35 Mus musculusGranulocyte colony-stimulating factor receptorNeutrophil chemotaxis 2.60.40.10 107 7 86 4.08 4.69
1cwvA03 77.10 InvasinYersinia pseudotuberculosis 2.60.40.920 102 6 83 4.04 4.86
1p53A01 76.81 Leukocyte migrationAdhesion to symbiontHeterophilic cell-cell adhesionRegulation of leukocyte mediated cytotoxicityT cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell 2.60.40.10 98 4 79 3.48 4.38
1cwvA02 76.70 InvasinYersinia pseudotuberculosis 2.60.40.920 97 5 81 3.56 4.38
1ujtA00 76.18 LuteolysisPositive regulation of axonogenesisCell surfaceIdentical protein bindingHomophilic cell adhesion 2.60.40.10 120 6 77 3.78 4.88
1cd9B02 75.87 Mus musculusGranulocyte colony-stimulating factor receptorNeutrophil chemotaxis 2.60.40.10 98 7 78 3.69 4.70
1fnhA02 75.83 FibronectinPeptide cross-linkingER-Golgi intermediate compartmentFibrinogen complexSubstrate adhesion-dependent cell spreading 2.60.40.10 90 13 79 3.53 4.44
1qr4A01 75.26 TenascinGallus gallus 2.60.40.10 87 14 77 3.71 4.78
1tdqA02 75.22 Nervous system developmentRattus norvegicusTenascinFocal adhesionProteinaceous extracellular matrix 2.60.40.10 90 10 79 3.38 4.25
2jllA04 75.04 Prion diseasesNeural cell adhesion moleculePlasma membraneNeuron cell-cell adhesionNeural cell adhesion molecule 2 2.60.40.10 91 7 77 3.58 4.62
1l0qA02 74.95 Methanosarcina mazeiORF492 2.60.40.670 90 5 71 3.32 4.61
3bgaA04 74.85 Galactose metabolismBacteroides thetaiotaomicronBeta-galactosidaseSphingolipid metabolismBeta-galactosidase [EC:3.2.1.23] 2.60.40.320 105 4 78 3.91 4.98
2nziA03 74.85 Structural constituent of muscleCalcium ion bindingSarcomere organizationTelethonin bindingActin filament binding 2.60.40.10 94 10 80 3.82 4.75
1fnhA03 74.82 FibronectinPeptide cross-linkingER-Golgi intermediate compartmentFibrinogen complexSubstrate adhesion-dependent cell spreading 2.60.40.10 89 5 79 3.57 4.49
1n6uA02 74.73 JAK-STAT cascadeIntegral to plasma membraneType I interferon receptor activityHomo sapiensResponse to virus 2.60.40.10 106 4 80 3.67 4.57
3hn3A02 74.71 Beta-glucuronidaseGlycosaminoglycan degradationGlycosaminoglycan catabolic processMetabolic pathwaysStarch and sucrose metabolism 2.60.40.320 103 4 79 3.74 4.71
2dtgE05 74.68 Insulin receptorInsulin receptor complexPhosphoinositide 3-kinase bindingPositive regulation of nitric oxide biosynthetic processPositive regulation of respiratory burst 2.60.40.10 98 6 79 3.72 4.68
1iarB02 74.68 Jak-STAT signaling pathwayInterleukin 4 receptorIntegral to plasma membraneReceptor signaling protein activityHematopoietic cell lineage 2.60.40.10 92 7 72 3.26 4.47
1l3wA03 74.66 EP-cadherinXenopus laevis 2.60.40.60 114 10 81 4.02 4.93
1cvrA03 74.14 Gingipain R [EC:3.4.22.37]Porphyromonas gingivalisGingipain R2 2.60.40.10 83 7 76 3.29 4.29
1owwA00 73.84 FibronectinER-Golgi intermediate compartmentPeptide cross-linkingFibrinogen complexSubstrate adhesion-dependent cell spreading 2.60.40.10 93 6 79 3.55 4.47
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Displaying entries 1 to 26 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1a02N02
SQRSAHELPMVERQDTDSCLVYGGQQMILTGQNFTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEIPEYRNKH
IRTPVKVNFYVINGKRKRSQPQHFTYHPV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1a02N02
SQRSAHELPMVERQDTDSCLVYGGQQMILTGQNFTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEIPEYRNKH
IRTPVKVNFYVINGKRKRSQPQHFTYHPV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:40

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:40

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:05

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"