Flow stage update by cuff on 17 May 2010 15:25
nice chopping
| Domain ID | CATH code | Image |
|---|---|---|
| 2h8pC00 | 1.10.287.70 |
nice chopping
nice chopping
User 'tronnberg' has allocated a chain to themselves for DomChopping with comment : Grabbed this chain via DomChop's "Get Me A Chain" button.
User 'tronnberg' has allocated a chain to themselves for DomChopping with comment : Grabbed this chain via DomChop's "Get Me A Chain" button.
Retrieved HMM(SAM) results for job ID SID7062889960089070 and inserted them into the database.
Chain HMM chopping
HMM(SAM) job SID7062889960089070 is not yet finished.
The entry "2h8pC" has been submitted to the HMM (SAM) webservice.
The entry "2h8pC" has been submitted to the HMM (SAM) webservice.
Retrieved "2h8pC" CATHEDRAL results for job ID SID1925273512846256 and inserted them into the database.
Chain "2h8pC" CATHEDRAL chopping from job SID1925273512846256
"2h8pC" CATHEDRAL job SID1925273512846256 is not yet finished.
The entry "2h8pC" has been submitted to the CATHEDRAL webservice.
The entry "2h8pC" has been submitted to the CATHEDRAL webservice.
ScanList with 9616 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2h8pC.scanlist" for "2h8pC"
Waiting for 2895 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Waiting for 2937 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Waiting for 2979 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Waiting for 3049 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Waiting for 3117 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Waiting for 3173 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Waiting for 3227 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Waiting for 3254 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Waiting for 3261 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Waiting for 3262 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Waiting for 3306 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Added putative Choppings from the DBS that ran () for Chain "2h8pC"
Number of chains in ballcock flow stages is 775 which is less than the max allowed of 800
Number of chains in ballcock flow stages is 800 which hits the the max allowed of 800
Number of chains in ballcock flow stages is 400 which hits the the max allowed of 400
ChopClose result is not good enough for automatic chopping
Putative ChopClose added based on similarity with "1s5lz"
No in_process hits for Chain "2h8pC" ready to be processed
NW result present for Chain "2h8pC"
All required files are present for Chain "2h8pC"
Beginning processing for Chain "2h8pC"
Chain passed the SIFT criteria
Adding chain from chain pdb dir "/cath/data/current/chainpdb"