Flow stage update by auto on 15 Aug 2007 19:10
Final ChopClose added based on similarity with "1llwA"
PDB Chain: 1ofdA
1ofdA
PDB 1ofd, Chain A
CATH Domains (4)
| Domain ID | CATH code | Image |
|---|---|---|
| 1ofdA01 | 3.60.20.10 | |
| 1ofdA02 | 3.20.20.70 | |
| 1ofdA03 | 3.20.20.70 | |
| 1ofdA04 | 2.160.20.60 |
Chain ATOM Sequence
>pdb|1ofdA CGVGFIANLRGKPDHTLVEQALKALGCMEHRGGCSADNDSGDGAGVMTAIPRELLAQWFNTRNLPMPDGDRLGVGMVFLP QEPSAREVARAYVEEVVRLEKLTVLGWREVPVNSDVLGIQAKNNQPHIEQILVTCPEGCAGDELDRRLYIARSIIGKKLA EDFYVCSFSCRTIVYKGMVRSIILGEFYLDLKNPGYTSNFAVYHRRFSTNTMPKWPLAQPMRLLGHNGEINTLLGNINWM AAREKELEVSGWTKAELEALTPIVNQANSDSYNLDSALELLVRTGRSPLEAAMILVPEAYKNQPALKDYPEISDFHDYYS GLQEPWDGPALLVFSDGKIVGAGLDRNGLRPARYCITKDDYIVLGSEAGVVDLPEVDIVEKGRLAPGQMIAVDLAEQKIL KNYQIKQQAAQKYPYGEWIKIQRQTVASDSFAEKTLFNDAQTVLQQQAAFGYTAEDVEMVVVPMASQGKEPTFCMGDDTP LAVLSHKPRLLYDYFKQRFAQVTNPPIDPLRENLVMSLAMFLGKRGNLLEPKAESARTIKLRSPLVNEVELQAIKTGQLQ VAEVSTLYDLDGVNSLEDALTNLVKTAIATVQAGAEILVLTDRPNGAILTENQSFIPPLLAVGAVHHHLIRAGLRLKASL IVDTAQCWSTHHFACLVGYGASAICPYLALESVRQWWLDEKTQKLMENGRLDRIDLPTALKNYRQSVEAGLFKILSKMGI SLLASYHGAQIFEAIGLGAELVEYAFAGTTSRVGGLTIADVAGEVMVFHGMAFKKLENFGFVNYRPGGEYHMNSPEMSKS LHKAVAAYDHYELYRQYLKDRPVTALRDLLDFNADQPAISLEEVESVESIVKRFCTGGMSLGALSREAHETLAIAMNRLG AKSNSGEGGEDVVRYLTLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQIASGRFGVTPEYLMSGKQLEIKMAQGAKPGEG GQLPGKKVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADII QISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEG CIMARVCHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDLLKVRSDVQLSKTQN LTLDCLLNLPDTKQNRQWLNHEPVHSNGPVLDDDILADPDIQEAINHQTTATKTYRLVNTDRTVGTRLSGAIAKKYGNNG FEGNITLNFQGAAGQSFGAFNLDGMTLHLQGEANDYVGKGMNGGEIVIVPHPQASFAPEDNVIIGNTCLYGATGGNLYAN GRAGERFAVRNSVGKAVIEGAGDHCCEYMTGGVIVVLGPVGRNVGAGMTGGLAYFLDEVGDLPEKINPEIITLQRITASK GEEQLKSLITAHVEHTGSPKGKAILANWSDYLGKFWQAVPPSEKDSPEANN
Chain COMBS Sequence
>pdb|1ofdA CGVGFIANLRGKPDHTLVEQALKALGCMEHRGGCSADNDSGDGAGVMTAIPRELLAQWFNTRNLPMPDGDRLGVGMVFLP QEPSAREVARAYVEEVVRLEKLTVLGWREVPVNSDVLGIQAKNNQPHIEQILVTCPEGCAGDELDRRLYIARSIIGKKLA EDFYVCSFSCRTIVYKGMVRSIILGEFYLDLKNPGYTSNFAVYHRRFSTNTMPKWPLAQPMRLLGHNGEINTLLGNINWM AAREKELEVSGWTKAELEALTPIVNQANSDSYNLDSALELLVRTGRSPLEAAMILVPEAYKNQPALKDYPEISDFHDYYS GLQEPWDGPALLVFSDGKIVGAGLDRNGLRPARYCITKDDYIVLGSEAGVVDLPEVDIVEKGRLAPGQMIAVDLAEQKIL KNYQIKQQAAQKYPYGEWIKIQRQTVASDSFAEKTLFNDAQTVLQQQAAFGYTAEDVEMVVVPMASQGKEPTFCMGDDTP LAVLSHKPRLLYDYFKQRFAQVTNPPIDPLRENLVMSLAMFLGKRGNLLEPKAESARTIKLRSPLVNEVELQAIKTGQLQ VAEVSTLYDLDGVNSLEDALTNLVKTAIATVQAGAEILVLTDRPNGAILTENQSFIPPLLAVGAVHHHLIRAGLRLKASL IVDTAQCWSTHHFACLVGYGASAICPYLALESVRQWWLDEKTQKLMENGRLDRIDLPTALKNYRQSVEAGLFKILSKMGI SLLASYHGAQIFEAIGLGAELVEYAFAGTTSRVGGLTIADVAGEVMVFHGMAFPEMAKKLENFGFVNYRPGGEYHMNSPE MSKSLHKAVAAYKVGGNGNNGEAYDHYELYRQYLKDRPVTALRDLLDFNADQPAISLEEVESVESIVKRFCTGGMSLGAL SREAHETLAIAMNRLGAKSNSGEGGEDVVRYLTLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQIASGRFGVTPEYLMSG KQLEIKMAQGAKPGEGGQLPGKKVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIG IGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALM GAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRT DLLKVRSDVQLSKTQNLTLDCLLNLPDTKQNRQWLNHEPVHSNGPVLDDDILADPDIQEAINHQTTATKTYRLVNTDRTV GTRLSGAIAKKYGNNGFEGNITLNFQGAAGQSFGAFNLDGMTLHLQGEANDYVGKGMNGGEIVIVPHPQASFAPEDNVII GNTCLYGATGGNLYANGRAGERFAVRNSVGKAVIEGAGDHCCEYMTGGVIVVLGPVGRNVGAGMTGGLAYFLDEVGDLPE KINPEIITLQRITASKGEEQLKSLITAHVEHTGSPKGKAILANWSDYLGKFWQAVPPSEKDSPEANNDVSLTGEKTLTSV
Chain History Events (25)
Chain chopped by auto on 15 Aug 2007 19:10
Final ChopClose added based on similarity with "1llwA"
Chain chopping chopclose by auto on 15 Aug 2007 19:09
Putative ChopClose added based on similarity with "1llwA"
Flow stage update by auto on 15 Aug 2007 19:00
No in_process hits for Chain "1ofdA" ready to be processed
Update comment by auto on 15 Aug 2007 18:38
Chain "1ofdA" hits Chain "1llzA" (100% over 100%) which is currently in process
Update comment by auto on 15 Aug 2007 17:59
Chain "1ofdA" hits Chain "1llwA" (100% over 100%) which is currently in process
Update comment by auto on 11 Aug 2007 10:06
Chain "1ofdA" hits Chain "1lm1A" (100% over 100%) which is currently in process
Update comment by auto on 10 Aug 2007 17:41
Chain "1ofdA" hits Chain "1lm1A" (100% over 100%) which is currently in process
Update comment by auto on 12 Jul 2007 20:52
Chain "1ofdA" hits Chain "1lm1A" (100% over 100%) which is currently in process
Flow stage update by auto on 12 Jul 2007 20:40
Chain "1ofdA" hits Chain "1lm1A" (100% over 100%) which is currently in process
Flow stage update by auto on 12 Jul 2007 20:30
NW result present for Chain "1ofdA"
Flow stage update by auto on 12 Jul 2007 20:07
All required files are present for Chain "1ofdA"
Flow stage update by auto on 12 Jul 2007 19:58
Beginning processing for Chain "1ofdA"
Flow stage update by auto on 23 Feb 2007 17:27
Chain passed the SIFT criteria
Property update by auto on 14 Jul 2006 14:39
Updated the chain's properties [modified "combs_md5_code" from "44ce9753b908a5ad4354edae60ad8d12" to "8a1dbaed1fc8264741daa2d63559a603"] [modified "seqres_md5_code" from "44ce9753b908a5ad4354edae60ad8d12" to "8a1dbaed1fc8264741daa2d63559a603"]
Unchopped by lewis on 27 Apr 2006 17:40
Unchopping this chain as as it has been identified having a chopping that should not be released in v3.0.0
Flow stage update by lewis on 27 Apr 2006 17:40
Unchopping this chain as as it has been identified having a chopping that should not be released in v3.0.0
Flow stage update by auto on 08 Mar 2006 21:41
Final ChopClose added based on similarity with "1llwA" [LEE: 0, LME: 8, MR: 0, LG: 15, SS: 91.50, SI: 100, SO: 100]
Chain chopped by auto on 08 Mar 2006 21:41
Final ChopClose added based on similarity with "1llwA" [LEE: 0, LME: 8, MR: 0, LG: 15, SS: 91.50, SI: 100, SO: 100]
Chain chopping chopclose by auto on 08 Mar 2006 21:39
Putative ChopClose added based on similarity with "1llwA" [LEE: 0, LME: 8, MR: 0, LG: 15, SS: 91.50, SI: 100, SO: 100]
Flow stage update by auto on 08 Mar 2006 14:26
NW result present for Chain "1ofdA"
Flow stage update by auto on 08 Mar 2006 14:16
All required files are present for Chain "1ofdA"
Flow stage update by auto on 08 Mar 2006 14:13
Beginning processing for Chain "1ofdA"
Flow stage update by auto on 05 Mar 2006 14:21
Chain passed the SIFT criteria
Insertion by auto on 05 Mar 2006 13:51
Adding chain from chain pdb dir "/cath/data/cathv3/chainpdb"
