Homologous Superfamily: 1.10.10.10

Molscript image for 1i27A00
Representative domain: 1i27A00
PDB coordinates for domain 1i27A00

"winged helix" repressor DNA binding domain

Classification Lineage (1.10.10.10)

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.10 Arc Repressor Mutant, subunit A
1.10.10.10 "winged helix" repressor DNA binding domain Gene3D

Summary of Non-Redundant Representatives

- - - - 217 254 286 466 1052

S35 Family Entries in Homologous Superfamily 1.10.10.10 (217)

CATH Level CATH code Representative Domain Representative Keywords Representative Thumbnail Number of Domains
1.10.10.10.1 1i27A00 General RNA polymerase II transcription factor activityTranscription initiation factor TFIIF alpha subunitTranscription coactivator activityTranscription factor TFIIF complexBasal transcription factors Molscript image for 1i27A00 5
1.10.10.10.2 1ucrB00 Desulfovibrio vulgaris str. HildenboroughProtein dsvD Molscript image for 1ucrB00 4
1.10.10.10.3 1y0uB00 Arsenical resistance operon repressor, putativeArchaeoglobus fulgidus Molscript image for 1y0uB00 2
1.10.10.10.4 1b6aA02 N-terminal protein amino acid modificationMethionine aminopeptidase 2Peptidyl-methionine modificationCytoplasmProtein processing Molscript image for 1b6aA02 14
1.10.10.10.5 1r7jA00 Sulfolobus solfataricusDNA-binding protein Molscript image for 1r7jA00 3
1.10.10.10.6 1dp7P00 Regulatory factor X 1/2/3Sequence-specific enhancer binding RNA polymerase II transcription factor activityImmune responseHomo sapiensMHC class II regulatory factor RFX1 Molscript image for 1dp7P00 1
1.10.10.10.7 3htsB00 Heat shock factor proteinKluyveromyces lactis Molscript image for 3htsB00 15
1.10.10.10.8 2obpA00 Ralstonia eutropha JMP134Putative DNA-binding protein Molscript image for 2obpA00 2
1.10.10.10.9 1hw1A01 Fatty acid metabolism regulator proteinEscherichia coli K-12GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA Molscript image for 1hw1A01 8
1.10.10.10.10 2vooB01 TRNA modificationNucleolusMRNA bindingProtein bindingLupus La protein Molscript image for 2vooB01 13
1.10.10.10.11 1mgtA02 Methylated-DNA--[protein]-cysteine S-methyltransferase.Thermococcus kodakarensisMethylated-DNA--protein-cysteine methyltransferaseMethylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Molscript image for 1mgtA02 11
1.10.10.10.12 1fp2A01 Isoflavone 7-O-methyltransferase.Medicago sativaIsoflavone-7-O-methyltransferase 8 Molscript image for 1fp2A01 8
1.10.10.10.13 2gauA02 Transcriptional regulator, Crp/Fnr familyPorphyromonas gingivalis Molscript image for 2gauA02 1
1.10.10.10.14 1xgsA02 Pyrococcus furiosusMethionyl aminopeptidase [EC:3.4.11.18]Methionine aminopeptidaseMethionyl aminopeptidase. Molscript image for 1xgsA02 9
1.10.10.10.15 1in4A02 Thermotoga maritimaHolliday junction DNA helicase RuvBHomologous recombinationIn phosphorous-containing anhydrides.Holliday junction ATP-dependent DNA helicase ruvB Molscript image for 1in4A02 10
1.10.10.10.16 1wrjA02 Methylated-DNA--[protein]-cysteine S-methyltransferase.Methylated-DNA--protein-cysteine methyltransferaseSulfolobus tokodaiiMethylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Molscript image for 1wrjA02 2
1.10.10.10.17 2ns0A00 Rhodococcus jostii RHA1Putative uncharacterized protein Molscript image for 2ns0A00 1
1.10.10.10.18 3f6vA00 Possible transcriptional regulator, ArsR family proteinRhodococcus jostii RHA1 Molscript image for 3f6vA00 1
1.10.10.10.19 2qvoA00 Archaeoglobus fulgidusUncharacterized protein AF_1382 Molscript image for 2qvoA00 1
1.10.10.10.20 1t6sB01 Chlorobaculum tepidumSegregation and condensation protein BSegregation and condensation protein B Molscript image for 1t6sB01 2
1.10.10.10.21 2od5A00 Molscript image for 2od5A00 1
1.10.10.10.22 2rkhA01 Molscript image for 2rkhA01 1
1.10.10.10.23 1on2A01 Bacillus subtilisTranscriptional regulator mntR Molscript image for 1on2A01 22
1.10.10.10.24 2o3fA00 Bacillus subtilisUncharacterized HTH-type transcriptional regulator ybbH Molscript image for 2o3fA00 3
1.10.10.10.25 1kgsA02 Thermotoga maritimaResponse regulatorTwo-component system, OmpR family, response regulator Molscript image for 1kgsA02 1
1.10.10.10.26 2qm3A01 Pyrococcus furiosusPutative uncharacterized protein Molscript image for 2qm3A01 1
1.10.10.10.27 2f2eA01 Pseudomonas aeruginosaPutative uncharacterized protein Molscript image for 2f2eA01 2
1.10.10.10.28 2p8tA01 Pyrococcus horikoshiiPutative uncharacterized protein PH0730 Molscript image for 2p8tA01 1
1.10.10.10.29 1t6sB02 Chlorobaculum tepidumSegregation and condensation protein BSegregation and condensation protein B Molscript image for 1t6sB02 2
1.10.10.10.30 1yo5C00 SAM pointed domain-containing ETS transcription factorHomo sapiensSAM pointed domain-containing Ets transcription factorProtein bindingMulticellular organismal development Molscript image for 1yo5C00 6
1.10.10.10.31 2hztC00 Bacillus subtilisUncharacterized HTH-type transcriptional regulator ytcD Molscript image for 2hztC00 6
1.10.10.10.32 3jthB00 Transcription activator HlyUVibrio vulnificus Molscript image for 3jthB00 6
1.10.10.10.33 1duxC00 Positive regulation of transcription from RNA polymerase II promoterPrion diseasesInsulin signaling pathwayEndometrial cancerProtein binding Molscript image for 1duxC00 8
1.10.10.10.34 3f6oB00 Rhodococcus jostii RHA1Probable transcriptional regulator, ArsR family protein Molscript image for 3f6oB00 2
1.10.10.10.35 3ctaA01 Riboflavin metabolismCTP-dependent riboflavin kinase.Riboflavin kinaseRiboflavin kinase, archaea type [EC:2.7.1.161]Thermoplasma acidophilum Molscript image for 3ctaA01 1
1.10.10.10.36 3b73A00 PhiH1 repressor-likeHaloarcula marismortui Molscript image for 3b73A00 2
1.10.10.10.37 1p2fA02 Thermotoga maritimaResponse regulatorTwo-component system, OmpR family, response regulator Molscript image for 1p2fA02 1
1.10.10.10.38 1stzA01 Heat-inducible transcription repressor hrcAThermotoga maritimaHeat-inducible transcriptional repressor Molscript image for 1stzA01 3
1.10.10.10.39 3h92A00 Methanocaldococcus jannaschiiUncharacterized ATP-binding protein MJECL15 Molscript image for 3h92A00 2
1.10.10.10.40 3jtgA01 Mus musculusE74-like factor 3/5ETS-related transcription factor Elf-3Sequence-specific DNA binding transcription factor activityEmbryo development Molscript image for 3jtgA01 2
1.10.10.10.41 3fm3A02 Methionine aminopeptidase 2Methionyl aminopeptidase [EC:3.4.11.18]Encephalitozoon cuniculiMethionyl aminopeptidase. Molscript image for 3fm3A02 12
1.10.10.10.42 1pueE00 Lymphoid progenitor cell differentiationPathways in cancerMyeloid dendritic cell differentiationErythrocyte differentiationAcute myeloid leukemia Molscript image for 1pueE00 2
1.10.10.10.43 1rz4A02 Eukaryotic translation initiation factor 3 subunit KTranslational initiationEukaryotic translation initiation factor 3 complexHomo sapiensProtein binding Molscript image for 1rz4A02 1
1.10.10.10.44 1r1tA00 Transcriptional repressor smtBSynechococcus elongatus PCC 7942 Molscript image for 1r1tA00 10
1.10.10.10.45 1a04A02 Two-component system, NarL family, nitrate/nitrite response regulator NarLTwo-component systemProtein bindingNitrate/nitrite response regulator protein narLEscherichia coli K-12 Molscript image for 1a04A02 3
1.10.10.10.46 1b9mB01 Transcriptional regulator modEMolybdate transport system regulatory proteinEscherichia coli K-12 Molscript image for 1b9mB01 8
1.10.10.10.47 1sfxB00 Archaeoglobus fulgidusPutative uncharacterized protein Molscript image for 1sfxB00 2
1.10.10.10.48 1hsjA03 Staphylococcus aureus subsp. aureus NCTC 8325HTH-type transcriptional regulator sarR Molscript image for 1hsjA03 2
1.10.10.10.49 2fokA02 Type II site-specific deoxyribonuclease.Planomicrobium okeanokoitesType-2 restriction enzyme FokI Molscript image for 2fokA02 3
1.10.10.10.50 2r3sB01 Molscript image for 2r3sB01 2
1.10.10.10.51 2esnA01 Probable transcriptional regulatorPseudomonas aeruginosa Molscript image for 2esnA01 4
1.10.10.10.52 3c7jA01 Pseudomonas syringae pv. syringaeRegulatory protein GntR Molscript image for 3c7jA01 2
1.10.10.10.53 3elkB00 Putative uncharacterized protein Ta0346Thermoplasma acidophilum Molscript image for 3elkB00 2
1.10.10.10.54 1ixcA01 LysR-type regulatory proteinCupriavidus necator Molscript image for 1ixcA01 6
1.10.10.10.55 1yg2A01 Vibrio choleraeVibrio cholerae pathogenic cyclePadR family transcriptional regulator, regulatory protein AphAPutative uncharacterized protein Molscript image for 1yg2A01 1
1.10.10.10.56 1lddA00 Mitotic sister chromatid segregationProtein ubiquitinationCyclin catabolic processAnaphase-promoting complex subunit 2Meiosis - yeast Molscript image for 1lddA00 4
1.10.10.10.57 1jhfA02 Repressor LexA [EC:3.4.21.88]LexA repressorProtein bindingEscherichia coli K-12Transcription Molscript image for 1jhfA02 4
1.10.10.10.58 2r7dA01 Exoribonuclease II [EC:3.1.13.1]Ribonuclease II family proteinDeinococcus radiodurans Molscript image for 2r7dA01 4
1.10.10.10.59 2dtrA01 DtxR family transcriptional regulator, Mn-dependent transcriptional regulatorDiphtheria toxin repressorCorynebacterium diphtheriae Molscript image for 2dtrA01 46
1.10.10.10.60 2o0yC01 Rhodococcus jostii RHA1Transcriptional regulator Molscript image for 2o0yC01 2
1.10.10.10.61 3edpA01 Listeria innocuaLin2111 protein Molscript image for 3edpA01 2
1.10.10.10.62 3i53B01 O-methyltransferaseStreptomyces carzinostaticus subsp. neocarzinostaticus Molscript image for 3i53B01 17
1.10.10.10.63 1r1uB00 CzrA proteinStaphylococcus aureus Molscript image for 1r1uB00 10
1.10.10.10.64 3bz6A01 Hypothetical proteinPseudomonas syringae pv. tomatoUPF0502 protein PSPTO_2686 Molscript image for 3bz6A01 2
1.10.10.10.65 1hw5A02 TranscriptionTranscription activator activityTranscription repressor activityProtein bindingCatabolite gene activator Molscript image for 1hw5A02 49
1.10.10.10.66 2oqgC00 Possible transcriptional regulator, ArsR family proteinRhodococcus jostii RHA1 Molscript image for 2oqgC00 4
1.10.10.10.67 3by6C01 GntR family transcriptional regulatorOenococcus oeni PSU-1Transcriptional regulator, GntR family Molscript image for 3by6C01 5
1.10.10.10.68 1z05A01 Vibrio choleraeTranscriptional regulator, ROK family Molscript image for 1z05A01 1
1.10.10.10.69 2fnaA03 Sulfolobus solfataricusPutative uncharacterized protein Molscript image for 2fnaA03 2
1.10.10.10.70 1mkmB01 Thermotoga maritimaTranscriptional regulator, IclR family Molscript image for 1mkmB01 4
1.10.10.10.71 1d3yA01 DNA topoisomerase VI subunit A [EC:5.99.1.3]Methanocaldococcus jannaschiiDNA topoisomerase (ATP-hydrolyzing).Type II DNA topoisomerase VI subunit A Molscript image for 1d3yA01 2
1.10.10.10.72 2ga1A02 Anabaena variabilis ATCC 29413Putative uncharacterized protein Molscript image for 2ga1A02 2
1.10.10.10.73 1s8nA02 Response regulator NasTProbable transcriptional regulatory protein pdtaRMycobacterium tuberculosis Molscript image for 1s8nA02 2
1.10.10.10.74 3bz6A02 Hypothetical proteinPseudomonas syringae pv. tomatoUPF0502 protein PSPTO_2686 Molscript image for 3bz6A02 2
1.10.10.10.75 2pg4A00 Aeropyrum pernixPutative uncharacterized protein Molscript image for 2pg4A00 2
1.10.10.10.76 1t0fA02 Transposition, DNA-mediatedTransposase activityEscherichia coliCytoplasmic chromosomeTransposon Tn7 transposition protein tnsA Molscript image for 1t0fA02 4
1.10.10.10.77 1sfuA00 Yaba-like disease virus34L protein Molscript image for 1sfuA00 2
1.10.10.10.78 1l3lA02 Transcriptional activator protein traRAgrobacterium tumefaciens Molscript image for 1l3lA02 8
1.10.10.10.79 3df8A00 Thermoplasma volcanium GSS1Putative uncharacterized protein TVG1336486 Molscript image for 3df8A00 1
1.10.10.10.80 2bgcH02 Listeria monocytogenesListeriolysin regulatory protein Molscript image for 2bgcH02 12
1.10.10.10.81 1xsvA00 Hypothetical proteinUPF0122 protein SAV1236Staphylococcus aureus subsp. aureus Mu50 Molscript image for 1xsvA00 5
1.10.10.10.82 2dt5B01 Thermus thermophilus HB8Redox-sensing transcriptional repressor rexAT-rich DNA-binding protein Molscript image for 2dt5B01 22
1.10.10.10.83 1fseB00 Bacillus subtilisLuxR family transcriptional regulator, transcriptional regulator of spore coat proteinSpore germination protein gerE Molscript image for 1fseB00 16
1.10.10.10.84 2fb1A02 Bacteroides thetaiotaomicronNUDIX family hydrolase Molscript image for 2fb1A02 4
1.10.10.10.85 1opcA00 Two-component systemTwo-component system, OmpR family, phosphate regulon response regulator OmpRTranscriptional regulatory protein ompRProtein bindingEscherichia coli K-12 Molscript image for 1opcA00 3
1.10.10.10.86 1ulyA01 Pyrococcus horikoshiiPutative uncharacterized protein PH1932 Molscript image for 1ulyA01 2
1.10.10.10.87 1cf7B00 Protein domain specific bindingTranscription factor Dp-2Transcription cofactor activityHomo sapiens Molscript image for 1cf7B00 1
1.10.10.10.88 1o57A01 Pur operon repressorBacillus subtilisPurine operon repressor Molscript image for 1o57A01 12
1.10.10.10.89 2g7uA01 Rhodococcus opacusPutative regulator of catechol degradative operon Molscript image for 2g7uA01 6
1.10.10.10.90 2heoA00 Mus musculusLeft-handed Z-DNA bindingZ-DNA-binding protein 1 Molscript image for 2heoA00 3
1.10.10.10.91 1lvaA02 Selenocysteine-specific elongation factorSelenocysteine-specific elongation factorMoorella thermoacetica Molscript image for 1lvaA02 1
1.10.10.10.92 1bjaA00 Transcription regulatory protein motAEnterobacteria phage T4 Molscript image for 1bjaA00 3
1.10.10.10.93 1ku3A00 RNA polymerase sigma factorThermus aquaticus Molscript image for 1ku3A00 9
1.10.10.10.94 2pn6A01 150aa long hypothetical transcriptional regulatorSulfolobus tokodaii Molscript image for 2pn6A01 29
1.10.10.10.95 3cuqA02 Transcription factor bindingTranscription factor complexRNA polymerase II transcription factor activityEndocytosisESCRT-II complex subunit VPS22 Molscript image for 3cuqA02 4
1.10.10.10.96 3bwgB01 Uncharacterized HTH-type transcriptional regulator yydKGntR family transcriptional regulator, transcriptional regulator of bglABacillus subtilis Molscript image for 3bwgB01 3
1.10.10.10.97 1fp1D01 Methyltransferases.Medicago sativaIsoliquiritigenin 2'-O-methyltransferase Molscript image for 1fp1D01 7
1.10.10.10.98 3cuqA03 Transcription factor bindingTranscription factor complexRNA polymerase II transcription factor activityEndocytosisESCRT-II complex subunit VPS22 Molscript image for 3cuqA03 4
1.10.10.10.99 1fc3B00 Geobacillus stearothermophilusStage 0 sporulation protein A Molscript image for 1fc3B00 7
1.10.10.10.100 1ub9A00 Pyrococcus horikoshiiPutative uncharacterized protein PH1061 Molscript image for 1ub9A00 1
1.10.10.10.101 1ft9A02 Rhodospirillum rubrumCooA protein Molscript image for 1ft9A02 2
1.10.10.10.102 2o0yB01 Rhodococcus jostii RHA1Transcriptional regulator Molscript image for 2o0yB01 2
1.10.10.10.103 1qbjC00 CytoplasmNucleolusHomo sapiensDouble-stranded RNA-specific adenosine deaminaseIn cyclic amidines. Molscript image for 1qbjC00 27
1.10.10.10.104 1ku9A01 DNA-binding protein MJ1563Methanocaldococcus jannaschii Molscript image for 1ku9A01 2
1.10.10.10.105 2fswA00 Porphyromonas gingivalisPutative uncharacterized protein Molscript image for 2fswA00 2
1.10.10.10.106 1fnnB03 Pyrobaculum aerophilumCell division control protein 6 (Cdc6), putativeArchaeal cell division control protein 6 Molscript image for 1fnnB03 2
1.10.10.10.107 2hs5A01 Rhodococcus jostii RHA1Probable transcriptional regulator, GntR family protein Molscript image for 2hs5A01 1
1.10.10.10.108 3cloA02 Bacteroides thetaiotaomicronTranscriptional regulator Molscript image for 3cloA02 4
1.10.10.10.109 2pi0A01 Interferon regulatory factor 3Interferon regulatory factor 3RNA polymerase II transcription factor activityTranscription from RNA polymerase II promoterRIG-I-like receptor signaling pathway Molscript image for 2pi0A01 10
1.10.10.10.110 3fxrA01 LysR type regulator of tsaMBCDComamonas testosteroni Molscript image for 3fxrA01 1
1.10.10.10.111 2ia1B02 BH3703 proteinBacillus halodurans Molscript image for 2ia1B02 4
1.10.10.10.112 1je8E00 Escherichia coli O157:H7Two-component system, NarL family, nitrate/nitrite response regulator NarLTwo-component systemNitrate/nitrite response regulator protein narL Molscript image for 1je8E00 12
1.10.10.10.113 1gxqA00 Phosphate regulon transcriptional regulatory protein phoBTwo-component systemTwo-component system, OmpR family, phosphate regulon response regulator PhoBProtein bindingEscherichia coli K-12 Molscript image for 1gxqA00 7
1.10.10.10.114 3dfgA01 Xanthomonas campestris pv. campestrisRegulatory proteinRegulatory protein recX Molscript image for 3dfgA01 1
1.10.10.10.115 3dfgA03 Xanthomonas campestris pv. campestrisRegulatory proteinRegulatory protein recX Molscript image for 3dfgA03 1
1.10.10.10.116 1repC02 Escherichia coli K-12Replication initiation protein Molscript image for 1repC02 1
1.10.10.10.117 1k78A01 Transcription from RNA polymerase II promoterPaired box protein Pax-5Organ morphogenesisPaired box protein 2/5Humoral immune response Molscript image for 1k78A01 5
1.10.10.10.118 2c6yB00 Regulation of transcription from RNA polymerase II promoterSequence-specific DNA bindingMagnesium ion bindingForkhead box protein KRNA polymerase II transcription factor activity Molscript image for 2c6yB00 5
1.10.10.10.119 1tbxB00 Sulfolobus virus 1Protein F-93 Molscript image for 1tbxB00 2
1.10.10.10.120 1hstA00 Histone H1/5Gallus gallusHistone H5 Molscript image for 1hstA00 3
1.10.10.10.121 1lvaA03 Selenocysteine-specific elongation factorSelenocysteine-specific elongation factorMoorella thermoacetica Molscript image for 1lvaA03 4
1.10.10.10.122 3dfgA02 Xanthomonas campestris pv. campestrisRegulatory proteinRegulatory protein recX Molscript image for 3dfgA02 1
1.10.10.10.123 3fzvB01 Probable transcriptional regulatorPseudomonas aeruginosa Molscript image for 3fzvB01 4
1.10.10.10.124 1q1hA00 Sulfolobus solfataricusTranscription initiation factor TFIIE alpha subunitTranscription factor EBasal transcription factors Molscript image for 1q1hA00 1
1.10.10.10.125 2ia2C01 Rhodococcus sp. DK17PcaR Molscript image for 2ia2C01 1
1.10.10.10.126 1k78B00 Protein C-ets-1Positive regulation of transcription from RNA polymerase II promoterMus musculusTranscription factor complexProtein binding Molscript image for 1k78B00 11
1.10.10.10.127 3c18A03 Exiguobacterium sibiricum 255-15Putative uncharacterized protein Molscript image for 3c18A03 3
1.10.10.10.128 1lvaA04 Selenocysteine-specific elongation factorSelenocysteine-specific elongation factorMoorella thermoacetica Molscript image for 1lvaA04 5
1.10.10.10.129 1biaA01 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]Biotin biosynthetic processProtein bindingEscherichia coli K-12Biotin metabolism Molscript image for 1biaA01 6
1.10.10.10.130 1j5yA01 Thermotoga maritimaTranscriptional regulator, biotin repressor family Molscript image for 1j5yA01 1
1.10.10.10.131 1lvaA01 Selenocysteine-specific elongation factorSelenocysteine-specific elongation factorMoorella thermoacetica Molscript image for 1lvaA01 1
1.10.10.10.132 1s3jA02 Bacillus subtilisUncharacterized HTH-type transcriptional regulator yusO Molscript image for 1s3jA02 2
1.10.10.10.133 2fmlB03 MutT/nudix family proteinEnterococcus faecalis Molscript image for 2fmlB03 2
1.10.10.10.134 1ldkB03 Cullin-1Cell cycle arrestInduction of apoptosis by intracellular signalsUbiquitin mediated proteolysisWnt signaling pathway Molscript image for 1ldkB03 2
1.10.10.10.135 2ijlB00 Agrobacterium tumefaciens str. C58Molybdenum-binding transcriptional repressorMolybdate transport system regulatory protein Molscript image for 2ijlB00 2
1.10.10.10.136 2dbbB01 Pyrococcus horikoshiiUncharacterized HTH-type transcriptional regulator PH0061 Molscript image for 2dbbB01 2
1.10.10.10.137 2ia2D01 Rhodococcus sp. DK17PcaR Molscript image for 2ia2D01 1
1.10.10.10.138 1yioA02 Response regulatory proteinPseudomonas fluorescens Molscript image for 1yioA02 4
1.10.10.10.139 3cuqB03 Homo sapiensVacuolar protein-sorting-associated protein 36ESCRT-II complex subunit VPS36Endocytosis Molscript image for 3cuqB03 2
1.10.10.10.140 2p5vA01 Neisseria meningitidis serogroup BTranscriptional regulator, AsnC familyLrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein Molscript image for 2p5vA01 29
1.10.10.10.141 1cf7A00 Protein domain specific bindingE2F transcription factor 4/5Transcription factor bindingTranscription factor E2F4TGF-beta signaling pathway Molscript image for 1cf7A00 1
1.10.10.10.142 1k78I00 Paired box protein Pax-5Transcription from RNA polymerase II promoterOrgan morphogenesisPaired box protein 2/5Homo sapiens Molscript image for 1k78I00 4
1.10.10.10.143 2irfG00 Mus musculusInterferon regulatory factor 2Interferon regulatory factor 2 Molscript image for 2irfG00 11
1.10.10.10.144 2z3yA01 Oxidoreductases.Lysine-specific histone demethylase 1AHistone demethylase activityNucleusProtein binding Molscript image for 2z3yA01 19
1.10.10.10.145 2hr3D02 Probable transcriptional regulatorPseudomonas aeruginosa Molscript image for 2hr3D02 4
1.10.10.10.146 1yyvB00 Putative transcriptional regulatorSalmonella enterica subsp. enterica serovar Typhimurium Molscript image for 1yyvB00 2
1.10.10.10.147 2w25A01 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory proteinLeucine-responsive regulatory proteinMycobacterium tuberculosis Molscript image for 2w25A01 24
1.10.10.10.148 1xb4B02 Protein targeting to vacuoleESCRT-II complex subunit VPS25Protein bindingVacuolar protein-sorting-associated protein 25Endocytosis Molscript image for 1xb4B02 8
1.10.10.10.149 1b4aA01 Geobacillus stearothermophilusArginine repressor Molscript image for 1b4aA01 12
1.10.10.10.150 1bm9A00 Molscript image for 1bm9A00 17
1.10.10.10.151 2hoeA01 Thermotoga maritimaTranscriptional regulator, XylR-related Molscript image for 2hoeA01 1
1.10.10.10.152 1u3eM02 DNA endonuclease I-HmuIBacillus phage SPO1Acting on ester bonds. Molscript image for 1u3eM02 1
1.10.10.10.153 2ia0A01 Pyrococcus furiosusUncharacterized HTH-type transcriptional regulator PF0864 Molscript image for 2ia0A01 2
1.10.10.10.154 2eshA00 Thermotoga maritimaPutative uncharacterized protein Molscript image for 2eshA00 1
1.10.10.10.155 2a6hF02 Thermus thermophilus HB8RNA polymerase sigma factorRNA polymerase primary sigma factor Molscript image for 2a6hF02 24
1.10.10.10.156 1ldjA06 Cullin-1Cell cycle arrestInduction of apoptosis by intracellular signalsUbiquitin mediated proteolysisWnt signaling pathway Molscript image for 1ldjA06 2
1.10.10.10.157 1pp8O00 39 kDa initiator binding proteinTrichomonas vaginalis Molscript image for 1pp8O00 7
1.10.10.10.158 1pdnC02 Transcription activator activitySequence-specific DNA bindingSegmentation protein pairedDrosophila melanogasterPositive regulation of transcription, DNA-dependent Molscript image for 1pdnC02 2
1.10.10.10.159 1xd7A00 Bacillus subtilisPutative HTH-type transcriptional regulator ywnA Molscript image for 1xd7A00 4
1.10.10.10.160 1fzpD00 Transcriptional regulator sarAStaphylococcus aureus Molscript image for 1fzpD00 3
1.10.10.10.161 1ka8A00 Putative P4-specific DNA primaseNucleotidyltransferases.Enterobacteria phage P4 Molscript image for 1ka8A00 6
1.10.10.10.162 1u5tB01 Protein targeting to vacuoleVacuolar protein-sorting-associated protein 36EndocytosisProtein retention in Golgi apparatusUbiquitin binding Molscript image for 1u5tB01 2
1.10.10.10.163 1qo0D02 Pseudomonas aeruginosaAliphatic amidase regulator Molscript image for 1qo0D02 2
1.10.10.10.164 2ipqX01 Salmonella enterica subsp. enterica serovar TyphiPutative uncharacterized protein Molscript image for 2ipqX01 1
1.10.10.10.165 3fm5A00 Rhodococcus jostii RHA1Transcriptional regulator Molscript image for 3fm5A00 4
1.10.10.10.166 1p4xA02 Staphylococcus aureus subsp. aureus NCTC 8325HTH-type transcriptional regulator sarS Molscript image for 1p4xA02 1
1.10.10.10.167 3broD00 Oenococcus oeni PSU-1Transcriptional regulator Molscript image for 3broD00 4
1.10.10.10.168 1ldjA07 Cullin-1Cell cycle arrestInduction of apoptosis by intracellular signalsUbiquitin mediated proteolysisWnt signaling pathway Molscript image for 1ldjA07 2
1.10.10.10.169 1gvjA00 Positive regulation of cellular component movementRNA polymerase II transcription factor activityProtein bindingTranscription from RNA polymerase II promoterProtein C-ets-1 Molscript image for 1gvjA00 5
1.10.10.10.170 1l0oC00 RNA polymerase sigma factorGeobacillus stearothermophilusProtein binding Molscript image for 1l0oC00 1
1.10.10.10.171 1p4xA01 Staphylococcus aureus subsp. aureus NCTC 8325HTH-type transcriptional regulator sarS Molscript image for 1p4xA01 1
1.10.10.10.172 2a61B00 Thermotoga maritimaTranscriptional regulator, MarR family Molscript image for 2a61B00 4
1.10.10.10.173 2fbhA00 Probable transcriptional regulatorPseudomonas aeruginosaMarR family transcriptional regulator, transcriptional regulator for hemolysin Molscript image for 2fbhA00 3
1.10.10.10.174 1lj9B00 Transcriptional regulator, MarR familyEnterococcus faecalis Molscript image for 1lj9B00 2
1.10.10.10.175 1ev7B02 Lechevalieria aerocolonigenesType-2 restriction enzyme NaeIType II site-specific deoxyribonuclease. Molscript image for 1ev7B02 4
1.10.10.10.176 3bddD00 Streptococcus suis 89/1591Transcriptional regulator, MarR family Molscript image for 3bddD00 4
1.10.10.10.177 2qwwC00 Listeria monocytogenes serotype 4b str. F2365Transcriptional regulator, MarR family Molscript image for 2qwwC00 8
1.10.10.10.178 1u5tB02 Protein targeting to vacuoleVacuolar protein-sorting-associated protein 36Negative regulation of transcription from RNA polymerase II promoter by glucoseUbiquitin bindingProtein retention in Golgi apparatus Molscript image for 1u5tB02 2
1.10.10.10.179 3cjnA00 Ruegeria pomeroyiTranscriptional regulator, MarR family Molscript image for 3cjnA00 1
1.10.10.10.180 1repC01 Replication initiation proteinEscherichia coli K-12 Molscript image for 1repC01 1
1.10.10.10.181 2fbiA00 Probable transcriptional regulatorPseudomonas aeruginosa Molscript image for 2fbiA00 1
1.10.10.10.182 3boqA00 Ruegeria pomeroyiTranscriptional regulator, MarR family Molscript image for 3boqA00 2
1.10.10.10.183 2nnnC00 Probable transcriptional regulatorPseudomonas aeruginosa Molscript image for 2nnnC00 10
1.10.10.10.184 3bjaA00 Bacillus cereus ATCC 10987Transcriptional regulator, MarR family, putative Molscript image for 3bjaA00 1
1.10.10.10.185 2rdpA00 Geobacillus stearothermophilusPutative transcriptional regulator MarR Molscript image for 2rdpA00 1
1.10.10.10.186 1hkqA00 Replication proteinPseudomonas syringae Molscript image for 1hkqA00 2
1.10.10.10.187 1jgsA00 Multiple antibiotic resistance protein marRMarR family transcriptional regulatorEscherichia coli K-12 Molscript image for 1jgsA00 1
1.10.10.10.188 3k69A00 Transcription regulator (Putative)Lactobacillus plantarum Molscript image for 3k69A00 1
1.10.10.10.189 3cdhA00 Ruegeria pomeroyiTranscriptional regulator, MarR family Molscript image for 3cdhA00 2
1.10.10.10.190 2nyxB01 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEINMycobacterium tuberculosis Molscript image for 2nyxB01 4
1.10.10.10.191 3bj6B00 Ruegeria pomeroyiTranscriptional regulator, MarR family Molscript image for 3bj6B00 2
1.10.10.10.192 3e6mA00 Ruegeria pomeroyiTranscriptional regulator, MarR family Molscript image for 3e6mA00 8
1.10.10.10.193 2zbkA01 DNA topoisomerase (ATP-hydrolyzing).Type II DNA topoisomerase VI subunit ASulfolobus shibatae Molscript image for 2zbkA01 4
1.10.10.10.194 2fxaA00 Bacillus subtilisHTH-type transcriptional regulator hprMarR family transcriptional regulator, protease production regulatory protein HPr Molscript image for 2fxaA00 4
1.10.10.10.195 1o7fA02 Ras guanyl-nucleotide exchange factor activityCAMP-mediated signalingCytosolRas GTPase bindingMus musculus Molscript image for 1o7fA02 1
1.10.10.10.196 1p6rA00 Bacillus licheniformisPenicillinase repressor Molscript image for 1p6rA00 2
1.10.10.10.197 1ufmA00 COP9 signalosome complex subunit 4Mus musculusProtein bindingSignalosome Molscript image for 1ufmA00 1
1.10.10.10.198 2oa4A01 Ruegeria pomeroyiPutative uncharacterized protein Molscript image for 2oa4A01 2
1.10.10.10.199 1d8jA00 Transcription initiation factor IIE subunit betaTranscription initiation factor TFIIE beta subunitHomo sapiensProtein bindingBasal transcription factors Molscript image for 1d8jA00 2
1.10.10.10.200 1p4wA00 Two-component systemErwinia amylovoraRcsB proteinTwo-component system, NarL family, captular synthesis response regulator RcsB Molscript image for 1p4wA00 1
1.10.10.10.201 1yqaA00 Histone H1/5Protein bindingDNA bindingRegulation of transcription, DNA-dependentNuclear nucleosome Molscript image for 1yqaA00 4
1.10.10.10.202 1aoyA00 Arginine repressorTranscriptional regulator of arginine metabolismPlasmid recombinationEscherichia coli K-12 Molscript image for 1aoyA00 1
1.10.10.10.203 2hgcA00 Bacillus subtilisUncharacterized protein yjcQ Molscript image for 2hgcA00 1
1.10.10.10.204 1tnsA00 TransposaseEnterobacteria phage Mu Molscript image for 1tnsA00 4
1.10.10.10.205 1e17A00 Transcription factor bindingNucleusCell cycle arrestForkhead box protein O4Insulin receptor signaling pathway Molscript image for 1e17A00 5
1.10.10.10.206 1fshA00 Neurotransmitter secretionReceptor clusteringCytoplasmic membrane-bounded vesicleSegment polarity protein dishevelled homolog DVL-1Synapse Molscript image for 1fshA00 1
1.10.10.10.207 2jt1A00 PefI proteinSalmonella enterica subsp. enterica serovar Typhimurium Molscript image for 2jt1A00 1
1.10.10.10.208 1w4mA00 Soluble fractionInhibition of phospholipase C activity involved in G-protein coupled receptor signaling pathwayHemopoietic progenitor cell differentiationActin cytoskeleton reorganizationRuffle organization Molscript image for 1w4mA00 3
1.10.10.10.209 1bbyA00 General RNA polymerase II transcription factor activityGeneral transcription factor IIF subunit 2In phosphorous-containing anhydrides.Homo sapiensTranscription initiation factor TFIIF beta subunit Molscript image for 1bbyA00 2
1.10.10.10.210 1dpuA00 DNA-dependent DNA replicationDNA replicationReplication protein A 32 kDa subunitNucleotide excision repairReplication factor A2 Molscript image for 1dpuA00 2
1.10.10.10.211 2krfA00 Transcriptional regulatory protein comABacillus subtilisTwo-component systemTwo-component system, NarL family, competent response regulator ComA Molscript image for 2krfA00 2
1.10.10.10.212 1j9iA00 Terminase small subunitEnterobacteria phage lambda Molscript image for 1j9iA00 2
1.10.10.10.213 2jtvA00 Rhodopseudomonas palustrisPutative uncharacterized protein Molscript image for 2jtvA00 1
1.10.10.10.214 1oyiA00 Vaccinia virusDouble-stranded RNA-binding protein Molscript image for 1oyiA00 1
1.10.10.10.215 1hksA00 NucleusResponse to heatDrosophila melanogasterProtein bindingPolytene chromosome Molscript image for 1hksA00 2
1.10.10.10.216 1s6lA01 Alkylmercury lyaseEscherichia coliAlkylmercury lyase. Molscript image for 1s6lA01 1
1.10.10.10.217 1v3fA00 Mus musculusPleckstrin-2 Molscript image for 1v3fA00 1

Close Structural Clusters 1.10.10.10 (< 5Å)

Summary of "distant" structural clusters found within this level of CATH.
Cluster ID Example Domain Domains in Cluster Structural Alignment (Core) Structural Alignment (Expanded)
00001.00010.00010.00010/SSG5/1 1yioA02 4
00001.00010.00010.00010/SSG5/2 2zbkA01 2
00001.00010.00010.00010/SSG5/3 1u5tB01 2
00001.00010.00010.00010/SSG5/4 1ka8A00 2
00001.00010.00010.00010/SSG5/5 1gvjA00 8
00001.00010.00010.00010/SSG5/6 1hstA00 3
00001.00010.00010.00010/SSG5/7 1fnnB03 2
00001.00010.00010.00010/SSG5/8 1in4A02 5
00001.00010.00010.00010/SSG5/9 1l3lA02 4
00001.00010.00010.00010/SSG5/10 1b4aA01 2
00001.00010.00010.00010/SSG5/11 2gauA02 4
00001.00010.00010.00010/SSG5/12 1kgsA02 4
00001.00010.00010.00010/SSG5/13 1repC01 2
00001.00010.00010.00010/SSG5/14 1hksA00 2
00001.00010.00010.00010/SSG5/15 3cuqA03 4
00001.00010.00010.00010/SSG5/16 1hw1A01 6
00001.00010.00010.00010/SSG5/17 1s6lA01 2
00001.00010.00010.00010/SSG5/18 1ixcA01 4
00001.00010.00010.00010/SSG5/19 1b6aA02 3
00001.00010.00010.00010/SSG5/20 2dt5B01 2
00001.00010.00010.00010/SSG5/21 3fm5A00 5
00001.00010.00010.00010/SSG5/22 1pdnC02 2
00001.00010.00010.00010/SSG5/23 1xsvA00 2
00001.00010.00010.00010/SSG5/24 1yg2A01 3
00001.00010.00010.00010/SSG5/25 2dbbB01 7
00001.00010.00010.00010/SSG5/26 1oyiA00 8
00001.00010.00010.00010/SSG5/27 3cuqA02 4
00001.00010.00010.00010/SSG5/28 2nnnC00 4
00001.00010.00010.00010/SSG5/29 2ijlB00 2
00001.00010.00010.00010/SSG5/30 1wrjA02 2
00001.00010.00010.00010/SSG5/31 1o57A01 3
00001.00010.00010.00010/SSG5/32 1p4xA02 2
00001.00010.00010.00010/SSG5/33 2jtvA00 3
00001.00010.00010.00010/SSG5/34 1qo0D02 2
00001.00010.00010.00010/SSG5/35 2hztC00 9
00001.00010.00010.00010/SSG5/36 2qvoA00 7
00001.00010.00010.00010/SSG5/37 1ulyA01 2
00001.00010.00010.00010/SSG5/38 1v3fA00 2
00001.00010.00010.00010/SSG5/39 1xd7A00 2
00001.00010.00010.00010/SSG5/40 3ctaA01 2
00001.00010.00010.00010/SSG5/41 2fnaA03 6
00001.00010.00010.00010/SSG5/42 2a61B00 2
00001.00010.00010.00010/SSG5/43 2fb1A02 2
00001.00010.00010.00010/SSG5/44 3cjnA00 5
00001.00010.00010.00010/SSG5/45 3bjaA00 3
00001.00010.00010.00010/SSG5/46 2ipqX01 2
00001.00010.00010.00010/SSG5/47 1on2A01 5
00001.00010.00010.00010/SSG5/48 2oqgC00 2
00001.00010.00010.00010/SSG5/49 3df8A00 3
00001.00010.00010.00010/SSG5/50 3dfgA02 3
00001.00010.00010.00010/SSG5/51 2rkhA01 3
00001.00010.00010.00010/SSG5/52 1sfuA00 16


Distant Structural Clusters 1.10.10.10 (< 9Å)

Summary of "distant" structural clusters found within this level of CATH.
Cluster ID Example Domain Domains in Cluster Structural Alignment (Core) Structural Alignment (Expanded)
00001.00010.00010.00010/SSGA9/1 1hstA00 6
00001.00010.00010.00010/SSGA9/2 2ia1B02 2
00001.00010.00010.00010/SSGA9/3 1q1hA00 8
00001.00010.00010.00010/SSGA9/4 3c7jA01 2
00001.00010.00010.00010/SSGA9/5 1ulyA01 3
00001.00010.00010.00010/SSGA9/6 3boqA00 6
00001.00010.00010.00010/SSGA9/7 3jtgA01 4
00001.00010.00010.00010/SSGA9/8 2fb1A02 2
00001.00010.00010.00010/SSGA9/9 2vooB01 4
00001.00010.00010.00010/SSGA9/10 1t0fA02 4
00001.00010.00010.00010/SSGA9/11 2o3fA00 2
00001.00010.00010.00010/SSGA9/12 1dp7P00 2
00001.00010.00010.00010/SSGA9/13 1fc3B00 3
00001.00010.00010.00010/SSGA9/14 1yqaA00 3
00001.00010.00010.00010/SSGA9/15 1xd7A00 16


Structural Comparisons for Non-redundant S35 Representatives of 1.10.10.10 ( entries)